RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 BRD3OSQ6XYD6 125 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 NKAIN4Q8IVV8 208 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 TMEM86BQ8N661 226 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 POU5F2Q8N7G0 328 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 CLDN22Q8N7P3 220 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 ATG16L2Q8NAA4 619 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 OR8B3Q8NGG8 313 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 HAVCR1Q96D42 359 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 CMBLQ96DG6 245 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 C7orf26Q96N11 449 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 OR8B2Q96RD0 313 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 EBF4Q9BQW3 602 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 NUDT16L1Q9BRJ7 211 aaKnown RBP9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 PARD6BQ9BYG5 372 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 POFUT1Q9H488 388 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 KAT8Q9H7Z6 458 aaKnown RBP9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 MARCH7Q9H992 704 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 TNFRSF19Q9NS68 423 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 C1RLQ9NZP8 487 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 RIMS3Q9UJD0 308 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 NDUFAF1Q9Y375 327 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 CMYA5Q8N3K9 4069 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 HTR3EA5X5Y0 456 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 SGCEO43556 437 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 FSTL3O95633 263 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 THRBP10828 461 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 RAC2P15153 192 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 PITPNBP48739 271 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 SRP9P49458 86 aaKnown RBP9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 MAGOHP61326 146 aaKnown RBP9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 SELPLGQ14242 412 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 Q6YL49 198 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 C1orf87Q8N0U7 546 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 DPP10Q8N608 796 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 OR13G1Q8NGZ3 307 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 ZNF420Q8TAQ5 688 aaPredicted RBP9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 PTP4A1Q93096 173 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 DACT3Q96B18 629 aaPredicted RBP9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 FAM71F1Q96KD3 344 aaPredicted RBP9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 CGREF1Q99674 301 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 CHIAQ9BZP6 476 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 TMEM165Q9HC07 324 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 POLE4Q9NR33 117 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 CLN8Q9UBY8 286 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 BAG5Q9UL15 447 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 STARD10Q9Y365 291 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 POMT1Q9Y6A1 747 aa9.73□□□□□ -0.85
CTDNEP1-212ENST00000576613 DOCK11Q5JSL3 2073 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 J3QW42 95 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 PHYHO14832 338 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 ENSAO43768 121 aaKnown RBP9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 ZNF205O95201 554 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 CYB5R3P00387 301 aaPredicted RBP9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 CTXN1P60606 82 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 FGF12P61328 243 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 RELBQ01201 579 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 PIN1Q13526 163 aaPredicted RBP9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 ZNF181Q2M3W8 571 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 VMACQ2NL98 169 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 ZNF404Q494X3 552 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 C1orf94Q6P1W5 598 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 ZNF620Q6ZNG0 422 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 CCDC80Q76M96 950 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 OR5AS1Q8N127 324 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 FITM2Q8N6M3 262 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 OR10AD1Q8NGE0 317 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 OR5L1Q8NGL2 311 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 OR10A6Q8NH74 314 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 SSMEM1Q8WWF3 244 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 BPIFA2Q96DR5 249 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 MEGF10Q96KG7 1140 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 ZNF582Q96NG8 517 aaPredicted RBP9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 RBM4BQ9BQ04 359 aaKnown RBP9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 TMEM246Q9BRR3 403 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 EMC7Q9NPA0 242 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 ZNF281Q9Y2X9 895 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 WNK1Q9H4A3 2382 aa9.72□□□□□ -0.85
CTDNEP1-212ENST00000576613 IFI30P13284 250 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 IRF2P14316 349 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 IFNA8P32881 189 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 RGS6P49758 472 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 ERFP50548 548 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 CRYBA2P53672 197 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 AQP6Q13520 282 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 NFYCQ13952 458 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 HLXQ14774 488 aaPredicted RBP9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 TAF9Q16594 264 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 ANKDD1AQ495B1 522 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 DCDC5Q6ZRR9 648 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 RHOUQ7L0Q8 258 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 VASH1Q7L8A9 365 aaPredicted RBP9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 IGFN1Q86VF2 1251 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 PCYOX1LQ8NBM8 494 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 OR8G5Q8NG78 346 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 TBC1D15Q8TC07 691 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 LRRC8CQ8TDW0 803 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 DYRK2Q92630 601 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 RASD2Q96D21 266 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 PCGF1Q9BSM1 259 aa9.71□□□□□ -0.86
CTDNEP1-212ENST00000576613 RNF114Q9Y508 228 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms