RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 FAM122BQ7Z309 247 aa12.82□□□□□ -0.36
CTNS-209ENST00000574776 TSEN54Q7Z6J9 526 aaKnown RBP12.82□□□□□ -0.36
CTNS-209ENST00000574776 KLHL36Q8N4N3 616 aa12.82□□□□□ -0.36
CTNS-209ENST00000574776 ZNF283Q8N7M2 679 aa12.82□□□□□ -0.36
CTNS-209ENST00000574776 FAM156AQ8NDB6 213 aa12.82□□□□□ -0.36
CTNS-209ENST00000574776 DEFB108BQ8NET1 73 aa12.82□□□□□ -0.36
CTNS-209ENST00000574776 RP9Q8TA86 221 aaKnown RBP12.82□□□□□ -0.36
CTNS-209ENST00000574776 ITLN1Q8WWA0 313 aa12.82□□□□□ -0.36
CTNS-209ENST00000574776 RASD2Q96D21 266 aa12.82□□□□□ -0.36
CTNS-209ENST00000574776 HSH2DQ96JZ2 352 aa12.82□□□□□ -0.36
CTNS-209ENST00000574776 ZNF570Q96NI8 536 aa12.82□□□□□ -0.36
CTNS-209ENST00000574776 NMNAT1Q9HAN9 279 aaPredicted RBP12.82□□□□□ -0.36
CTNS-209ENST00000574776 NTN4Q9HB63 628 aa12.82□□□□□ -0.36
CTNS-209ENST00000574776 PATZ1Q9HBE1 687 aaKnown RBP12.82□□□□□ -0.36
CTNS-209ENST00000574776 DDX28Q9NUL7 540 aaKnown RBP12.82□□□□□ -0.36
CTNS-209ENST00000574776 PLEK2Q9NYT0 353 aa12.82□□□□□ -0.36
CTNS-209ENST00000574776 PPP1R3CQ9UQK1 317 aa12.82□□□□□ -0.36
CTNS-209ENST00000574776 COA3Q9Y2R0 106 aaPredicted RBP12.82□□□□□ -0.36
CTNS-209ENST00000574776 MGAM2Q2M2H8 2515 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 TEX13CA0A0J9YWL9 993 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 NME4O00746 187 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 PTP4A3O75365 173 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 COX4I1P13073 169 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 SLC7A2P52569 658 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 ZNF154Q13106 437 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 ZMYND11Q15326 602 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 TMEM155Q4W5P6 130 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 CCDC92Q53HC0 331 aaPredicted RBP12.81□□□□□ -0.36
CTNS-209ENST00000574776 AWAT1Q58HT5 328 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 RBMS3Q6XE24 437 aaKnown RBP12.81□□□□□ -0.36
CTNS-209ENST00000574776 ARPINQ7Z6K5 226 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 OR5AS1Q8N127 324 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 SPICQ8N5J4 248 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 SIGLECL1Q8N7X8 197 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 ATG16L2Q8NAA4 619 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 OR1F12Q8NHA8 337 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 SGMS2Q8NHU3 365 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 SLC7A13Q8TCU3 470 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 POP5Q969H6 163 aaKnown RBP12.81□□□□□ -0.36
CTNS-209ENST00000574776 ZMYND19Q96E35 227 aaPredicted RBP12.81□□□□□ -0.36
CTNS-209ENST00000574776 FAM46AQ96IP4 442 aaKnown RBP12.81□□□□□ -0.36
CTNS-209ENST00000574776 ASH2LQ9UBL3 628 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 IL19Q9UHD0 177 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 AUP1Q9Y679 476 aa12.81□□□□□ -0.36
CTNS-209ENST00000574776 SLC22A2O15244 555 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 RER1O15258 196 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 SURF4O15260 269 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 KHDRBS3O75525 346 aaKnown RBP12.8□□□□□ -0.36
CTNS-209ENST00000574776 NDUFB2O95178 105 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 DBHP09172 617 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 NCK1P16333 377 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 GSK3BP49841 420 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 LSM6P62312 80 aaKnown RBP12.8□□□□□ -0.36
CTNS-209ENST00000574776 BTG1P62324 171 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 GUCY1A3Q02108 690 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 AQP6Q13520 282 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 KRR1Q13601 381 aaKnown RBP12.8□□□□□ -0.36
CTNS-209ENST00000574776 HLXQ14774 488 aaPredicted RBP12.8□□□□□ -0.36
CTNS-209ENST00000574776 ARMCX4Q5H9R4 360 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 CYP4Z1Q86W10 505 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 GLB1L2Q8IW92 636 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 BCL6BQ8N143 479 aaPredicted RBP12.8□□□□□ -0.36
CTNS-209ENST00000574776 COG8Q96MW5 612 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 DUX5Q96PT3 197 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 OR2V2Q96R30 315 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 SIGLEC11Q96RL6 698 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 HOPXQ9BPY8 73 aaPredicted RBP12.8□□□□□ -0.36
CTNS-209ENST00000574776 C1QTNF5Q9BXJ0 243 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 NDEL1Q9GZM8 345 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 SYT4Q9H2B2 425 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 NRIP3Q9NQ35 241 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 ZNF69Q9UC07 566 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 IL20RAQ9UHF4 553 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 NUP50Q9UKX7 468 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 SIGLEC7Q9Y286 467 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 TMEM5Q9Y2B1 443 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 POLR3KQ9Y2Y1 108 aaPredicted RBP12.8□□□□□ -0.36
CTNS-209ENST00000574776 INSIG2Q9Y5U4 225 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 IER3IP1Q9Y5U9 82 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 ENPP4Q9Y6X5 453 aa12.8□□□□□ -0.36
CTNS-209ENST00000574776 OR6C6A6NF89 314 aa12.79□□□□□ -0.36
CTNS-209ENST00000574776 TMEM178BH3BS89 294 aa12.79□□□□□ -0.36
CTNS-209ENST00000574776 SOCS2O14508 198 aa12.79□□□□□ -0.36
CTNS-209ENST00000574776 RAC2P15153 192 aa12.79□□□□□ -0.36
CTNS-209ENST00000574776 ZNF12P17014 697 aa12.79□□□□□ -0.36
CTNS-209ENST00000574776 SDHAP31040 664 aa12.79□□□□□ -0.36
CTNS-209ENST00000574776 KLF17Q5JT82 389 aaPredicted RBP12.79□□□□□ -0.36
CTNS-209ENST00000574776 GPR139Q6DWJ6 353 aa12.79□□□□□ -0.36
CTNS-209ENST00000574776 OR2T2Q6IF00 324 aa12.79□□□□□ -0.36
CTNS-209ENST00000574776 FAM162AQ96A26 154 aa12.79□□□□□ -0.36
CTNS-209ENST00000574776 NUAK2Q9H093 628 aa12.79□□□□□ -0.36
CTNS-209ENST00000574776 ANKRD19PQ9H560 264 aa12.79□□□□□ -0.36
CTNS-209ENST00000574776 EFCAB1Q9HAE3 211 aa12.79□□□□□ -0.36
CTNS-209ENST00000574776 GCM1Q9NP62 436 aa12.79□□□□□ -0.36
CTNS-209ENST00000574776 PTTG3PQ9NZH4 202 aa12.79□□□□□ -0.36
CTNS-209ENST00000574776 VSX1Q9NZR4 365 aaPredicted RBP12.79□□□□□ -0.36
CTNS-209ENST00000574776 H0YL77 283 aa12.78□□□□□ -0.36
CTNS-209ENST00000574776 ZNF205O95201 554 aa12.78□□□□□ -0.36
CTNS-209ENST00000574776 GPANK1O95872 356 aa12.78□□□□□ -0.36
CTNS-209ENST00000574776 H1F0P07305 194 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms