RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 RNFT1Q5M7Z0 435 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 BCL2L15Q5TBC7 163 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 TMEM244Q5VVB8 128 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 XKRXQ6PP77 449 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 STAC2Q6ZMT1 411 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 CHMP1BQ7LBR1 199 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 GJC3Q8NFK1 279 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 CHPT1Q8WUD6 406 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 MOB1AQ9H8S9 216 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 RNF122Q9H9V4 155 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 FAM206AQ9NX38 181 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 PHF3Q92576 2039 aaKnown RBP25.7■■□□□ 1.71
CTDNEP1-208ENST00000573600 DMXL1Q9Y485 3027 aa25.7■■□□□ 1.7
CTDNEP1-208ENST00000573600 KLK10O43240 276 aa25.7■■□□□ 1.7
CTDNEP1-208ENST00000573600 EFSO43281 561 aa25.7■■□□□ 1.7
CTDNEP1-208ENST00000573600 UBCP0CG48 685 aaKnown RBP25.7■■□□□ 1.7
CTDNEP1-208ENST00000573600 ACHEP22303 614 aa25.7■■□□□ 1.7
CTDNEP1-208ENST00000573600 PTBP1P26599 531 aaKnown RBP eCLIP25.7■■□□□ 1.75e-14■□□□□ 9.8
CTDNEP1-208ENST00000573600 SYT9Q86SS6 491 aa25.7■■□□□ 1.7
CTDNEP1-208ENST00000573600 OR51A4Q8NGJ6 313 aa25.7■■□□□ 1.7
CTDNEP1-208ENST00000573600 PPP1R14AQ96A00 147 aa25.7■■□□□ 1.7
CTDNEP1-208ENST00000573600 PRRG4Q9BZD6 226 aa25.7■■□□□ 1.7
CTDNEP1-208ENST00000573600 SLC25A18Q9H1K4 315 aa25.7■■□□□ 1.7
CTDNEP1-208ENST00000573600 PARPBPQ9NWS1 579 aa25.7■■□□□ 1.7
CTDNEP1-208ENST00000573600 HHLA2Q9UM44 414 aa25.7■■□□□ 1.7
CTDNEP1-208ENST00000573600 DHDHQ9UQ10 334 aa25.7■■□□□ 1.7
CTDNEP1-208ENST00000573600 NOSIPQ9Y314 301 aaKnown RBP25.7■■□□□ 1.7
CTDNEP1-208ENST00000573600 CPN1P15169 458 aa25.69■■□□□ 1.7
CTDNEP1-208ENST00000573600 SDHBP21912 280 aa25.69■■□□□ 1.7
CTDNEP1-208ENST00000573600 EVX1P49640 407 aa25.69■■□□□ 1.7
CTDNEP1-208ENST00000573600 GRB2P62993 217 aaKnown RBP25.69■■□□□ 1.7
CTDNEP1-208ENST00000573600 FOXC1Q12948 553 aa25.69■■□□□ 1.7
CTDNEP1-208ENST00000573600 ENDOGQ14249 297 aaKnown RBP25.69■■□□□ 1.7
CTDNEP1-208ENST00000573600 FAM27BQ5VT28 67 aa25.69■■□□□ 1.7
CTDNEP1-208ENST00000573600 LYSMD2Q8IV50 215 aa25.69■■□□□ 1.7
CTDNEP1-208ENST00000573600 HTRA1Q92743 480 aa25.69■■□□□ 1.7
CTDNEP1-208ENST00000573600 ORAI1Q96D31 301 aa25.69■■□□□ 1.7
CTDNEP1-208ENST00000573600 SDHCQ99643 169 aaPredicted RBP25.69■■□□□ 1.7
CTDNEP1-208ENST00000573600 PNRC2Q9NPJ4 139 aaKnown RBP25.69■■□□□ 1.7
CTDNEP1-208ENST00000573600 TFECO14948 347 aaPredicted RBP25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 RER1O15258 196 aa25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 PSMD7P51665 324 aa25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 ZNF79Q15937 498 aa25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 CNIH2Q6PI25 160 aa25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 LRRC28Q86X40 367 aaPredicted RBP25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 SRRQ9GZT4 340 aa25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 V9GY05 133 aa25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 CEP250Q9BV73 2442 aa25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 CD2P06729 351 aa25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 SLC2A2P11168 524 aaPredicted RBP25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 ATF1P18846 271 aa25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 PSMA6P60900 246 aaKnown RBP25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 HIST1H3AP68431 136 aa25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 RNPS1Q15287 305 aaKnown RBP25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 HIST2H3PS2Q5TEC6 136 aa25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 Q6ZNX1 250 aa25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 HIST2H3AQ71DI3 136 aa25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 MINDY2Q8NBR6 621 aa25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 TRMT10AQ8TBZ6 339 aaKnown RBP25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 CRLF2Q9HC73 371 aa25.68■■□□□ 1.7
CTDNEP1-208ENST00000573600 ZNF724A8MTY0 619 aa25.67■■□□□ 1.7
CTDNEP1-208ENST00000573600 MRPL33O75394 65 aaKnown RBP25.67■■□□□ 1.7
CTDNEP1-208ENST00000573600 ZNF24P17028 368 aa25.67■■□□□ 1.7
CTDNEP1-208ENST00000573600 ELMOD2Q8IZ81 293 aa25.67■■□□□ 1.7
CTDNEP1-208ENST00000573600 ZNF433Q8N7K0 673 aaPredicted RBP25.67■■□□□ 1.7
CTDNEP1-208ENST00000573600 GDPD1Q8N9F7 314 aa25.67■■□□□ 1.7
CTDNEP1-208ENST00000573600 SOSTQ9BQB4 213 aa25.67■■□□□ 1.7
CTDNEP1-208ENST00000573600 MRI1Q9BV20 369 aa25.67■■□□□ 1.7
CTDNEP1-208ENST00000573600 LINC00470Q9BZP3 86 aa25.67■■□□□ 1.7
CTDNEP1-208ENST00000573600 BCO1Q9HAY6 547 aa25.67■■□□□ 1.7
CTDNEP1-208ENST00000573600 DDX28Q9NUL7 540 aaKnown RBP25.67■■□□□ 1.7
CTDNEP1-208ENST00000573600 FAM25AB3EWG3 89 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 FAM25CB3EWG5 89 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 FAM25GB3EWG6 89 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 STEAP3Q658P3 488 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 LRRTM1Q86UE6 522 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 ZADH2Q8N4Q0 377 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 ASB5Q8WWX0 329 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 WDYHV1Q96HA8 205 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 GFI1Q99684 422 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 PBOV1Q9GZY1 135 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 OR6C65A6NJZ3 312 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 IFITM5A6NNB3 132 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 AIPO00170 330 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 IGHG3P01860 377 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 CTSSP25774 331 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 PMP22Q01453 160 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 DCDC5Q6ZRR9 648 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 CENPSQ8N2Z9 138 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 SAMD12Q8N8I0 201 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 FNDC9Q8TBE3 224 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 ZNF837Q96EG3 531 aaPredicted RBP25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 TMEM38BQ9NVV0 291 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 SPRR3Q9UBC9 169 aa25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 NUFIP1Q9UHK0 495 aaKnown RBP25.66■■□□□ 1.7
CTDNEP1-208ENST00000573600 LOC107986453A0A1B0GWG9 222 aa25.65■■□□□ 1.7
CTDNEP1-208ENST00000573600 ELK1P19419 428 aa25.65■■□□□ 1.7
CTDNEP1-208ENST00000573600 IGFL3Q6UXB1 125 aa25.65■■□□□ 1.7
CTDNEP1-208ENST00000573600 LRRC18Q8N456 261 aa25.65■■□□□ 1.7
CTDNEP1-208ENST00000573600 SNIP1Q8TAD8 396 aaKnown RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms