RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 GCNT7Q6ZNI0 430 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 Q6ZNX1 250 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 AHSA2Q719I0 299 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 FAM214BQ7L5A3 538 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 SSX6Q7RTT6 188 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 ARPINQ7Z6K5 226 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 S100A7AQ86SG5 101 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 TMPRSS11BQ86T26 416 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 IGFN1Q86VF2 1251 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 RALGPS2Q86X27 583 aaPredicted RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 NRMQ8IXM6 262 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 LINC00528Q8N1L1 170 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 STPG2Q8N412 459 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 KRTCAP2Q8N6L1 136 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 CDRT4Q8N9R6 151 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 BOLLQ8N9W6 283 aaKnown RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 ZNF740Q8NDX6 193 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 OR52L2PQ8NGH6 319 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 OR9A4Q8NGU2 314 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 OR6N2Q8NGY6 317 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 OR14L1PQ8NHC6 308 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 COQ8AQ8NI60 647 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 WDR20Q8TBZ3 569 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 MAGEE2Q8TD90 523 aaPredicted RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 CA5BP1Q8WTZ4 195 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 FAM3CQ92520 227 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 NEIL2Q969S2 332 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 EXOSC8Q96B26 276 aaKnown RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 ANKRD9Q96BM1 317 aaPredicted RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 C12orf43Q96C57 262 aaKnown RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 LGALS12Q96DT0 336 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 SMIM12Q96EX1 92 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 BMFQ96LC9 184 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 GPR137Q96N19 417 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 RDH12Q96NR8 316 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 OR14A2Q96R54 314 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 DDOQ99489 341 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 TSNAXQ99598 290 aaKnown RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 CDX2Q99626 313 aaPredicted RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 APOOQ9BUR5 198 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 MCRIP2Q9BUT9 160 aaKnown RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 HDHD5Q9BXW7 423 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 TEX101Q9BY14 249 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 SLC17A9Q9BYT1 436 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 RBM38Q9H0Z9 239 aaKnown RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 ING2Q9H160 280 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 SYT4Q9H2B2 425 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 TCEAL2Q9H3H9 227 aaPredicted RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 C6orf106Q9H6K1 298 aaPredicted RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 DDX31Q9H8H2 851 aaKnown RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 PLEKHA1Q9HB21 404 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 FGF22Q9HCT0 170 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 SPAG4Q9NPE6 437 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 CUTCQ9NTM9 273 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 ASB6Q9NWX5 421 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 COA4Q9NYJ1 87 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 FRRS1LQ9P0K9 344 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 PPP4R1LQ9P1A2 415 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 EPHA6Q9UF33 1036 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 STEAP1Q9UHE8 339 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 SLC23A1Q9UHI7 598 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 ZNF346Q9UL40 294 aaKnown RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 B3GNT3Q9Y2A9 372 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 ASB4Q9Y574 426 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 A0A1B0GVI7 797 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 A0A1W2PPE3 182 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 A0A1W2PPV9 198 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 A0A1W2PRG6 482 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 TCRBV3S1A0A5B6 114 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 C1orf226A1L170 272 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 PRSS37A4D1T9 235 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 PSMB11A5LHX3 300 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 FAM172BPA6NC97 362 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 OR6C68A6NDL8 312 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 PRORSD1PA6NEY8 169 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 EFCAB7A8K855 629 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 FAM25AB3EWG3 89 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 FAM25CB3EWG5 89 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 FAM25GB3EWG6 89 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 SAP18O00422 153 aaKnown RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 IMPA2O14732 288 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 CHEK1O14757 476 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 SGCEO43556 437 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 SLC19A2O60779 497 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 FCN3O75636 299 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 OR7A10O76100 309 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 NDUFA7O95182 113 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 RCBTB2O95199 551 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 IGHV2-70P01814 119 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 CATP04040 527 aaKnown RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 CSN3P07498 182 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 HIST1H2AGP0C0S8 130 aaPredicted RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 TMEM225BP0DP42 221 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 JUNBP17275 347 aaPredicted RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 SDC1P18827 310 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 ATP6V1B2P21281 511 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 GABRR1P24046 479 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 COL8A1P27658 744 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 PEBP1P30086 187 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms