RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-222	ENST00000570139	SSR4	P51571	173 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	P2RX1	P51575	399 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	MLLT10	P55197	1068 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	CTBP2	P56545	445 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	CDC42	P60953	191 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	TSPAN31	Q12999	210 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	SKP2	Q13309	424 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	OR1Q1	Q15612	314 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	KCTD21	Q4G0X4	260 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	RBM48	Q5RL73	367 aa	Known RBP	6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	ZNF691	Q5VV52	312 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	TTC33	Q6PID6	262 aa	Predicted RBP	6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	OLIG3	Q7RTU3	272 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	COMTD1	Q86VU5	262 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	RBM45	Q8IUH3	476 aa	Known RBP	6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	APLF	Q8IW19	511 aa	Predicted RBP	6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	FAM98A	Q8NCA5	519 aa	Known RBP	6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	NPEPL1	Q8NDH3	523 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	OR4K5	Q8NGD3	323 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	OR4C3	Q8NH37	302 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	TMEM239	Q8WW34	195 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	TMEM234	Q8WY98	164 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	ST8SIA1	Q92185	356 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	C8orf44	Q96CB5	159 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	NXPE2	Q96DL1	559 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	URB1-AS1	Q96HZ7	61 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	FAM71F1	Q96KD3	344 aa	Predicted RBP	6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	CNBD2	Q96M20	576 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	MBOAT4	Q96T53	435 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	SLC25A33	Q9BSK2	321 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	TMEM43	Q9BTV4	400 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	ZNF426	Q9BUY5	554 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	QTRT1	Q9BXR0	403 aa	Known RBP	6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	ING2	Q9H160	280 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	RIBC2	Q9H4K1	309 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	NGB	Q9NPG2	151 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	SLC7A7	Q9UM01	511 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	WDR83OS	Q9Y284	106 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	MYRF	Q9Y2G1	1151 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	PLEKHA6	Q9Y2H5	1048 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	MED31	Q9Y3C7	131 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	GMPPB	Q9Y5P6	360 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	SDK1	Q7Z5N4	2213 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	ASCC3	Q8N3C0	2202 aa	Known RBP	6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139	ZNF292	O60281	2723 aa		6.23	□□□□□ -1.41
CNOT1-222	ENST00000570139		A0A087WUU8	490 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	IGLV3-32	A0A0A0MS00	114 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	NPIPA5	A0A0B4J1W7	369 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	TRBV4-1	A0A0J9YWV2	114 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139		A0A1W2PNU3	283 aa	Predicted RBP	6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	CLDN24	A6NM45	220 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	NPIPA7	E9PJI5	369 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139		E9PQ18	207 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	TPST2	O60704	377 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	MRPS14	O60783	128 aa	Known RBP	6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	ICOSLG	O75144	302 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	BCAS1	O75363	584 aa	Predicted RBP	6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	OR2J2	O76002	312 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	WISP2	O76076	250 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	OR6B1	O95007	311 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	NADK	O95544	446 aa	Predicted RBP	6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	ANGPTL1	O95841	491 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	LYN	P07948	512 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	UBTFL6	P0CB48	400 aa	Predicted RBP	6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	FAM106CP	P0CH98	169 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	NPIPA8	P0DM63	369 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	PRKACG	P22612	351 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	LMO1	P25800	156 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	HTR2A	P28223	471 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	OTX2	P32243	289 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	GGT2	P36268	569 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	MNDA	P41218	407 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	SLC1A3	P43003	542 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	GSS	P48637	474 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	DLX5	P56178	289 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	GABARAPL2	P60520	117 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	CXCR4	P61073	352 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	SEC61A1	P61619	476 aa	Known RBP	6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	RPS18	P62269	152 aa	Known RBP	6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	CX3CL1	P78423	397 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	ROR2	Q01974	943 aa	Known RBP	6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	TMEM44	Q2T9K0	475 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	AGAP6	Q5VW22	663 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	FAM166A	Q6J272	317 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	H3F3C	Q6NXT2	135 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	UGT2A3	Q6UWM9	527 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	RASSF6	Q6ZTQ3	369 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	ASCL5	Q7RTU5	278 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	RPS19BP1	Q86WX3	136 aa	Known RBP	6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	LDLRAD3	Q86YD5	345 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	HS3ST5	Q8IZT8	346 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	SLC24A4	Q8NFF2	622 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	OR9Q2	Q8NGE9	314 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	OR5W2	Q8NH69	310 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	TEX47	Q8TBZ9	253 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	TRUB1	Q8WWH5	349 aa	Known RBP	6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	DPF1	Q92782	380 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	OSTF1	Q92882	214 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	HGD	Q93099	445 aa		6.22	□□□□□ -1.41
CNOT1-222	ENST00000570139	NIPSNAP1	Q9BPW8	284 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms