RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 GPANK1O95872 356 aa17.29■□□□□ 0.36
CLK3-225ENST00000569063 TGFAP01135 160 aa17.29■□□□□ 0.36
CLK3-225ENST00000569063 GASTP01350 101 aa17.29■□□□□ 0.36
CLK3-225ENST00000569063 CRYBB2P43320 205 aa17.29■□□□□ 0.36
CLK3-225ENST00000569063 GPR6P46095 362 aaPredicted RBP17.29■□□□□ 0.36
CLK3-225ENST00000569063 ZNF81P51508 661 aa17.29■□□□□ 0.36
CLK3-225ENST00000569063 HIST1H3AP68431 136 aa17.29■□□□□ 0.36
CLK3-225ENST00000569063 FAM209AQ5JX71 171 aa17.29■□□□□ 0.36
CLK3-225ENST00000569063 HIST2H3PS2Q5TEC6 136 aa17.29■□□□□ 0.36
CLK3-225ENST00000569063 HIST2H3AQ71DI3 136 aa17.29■□□□□ 0.36
CLK3-225ENST00000569063 ZBTB46Q86UZ6 589 aa17.29■□□□□ 0.36
CLK3-225ENST00000569063 OR1F12Q8NHA8 337 aa17.29■□□□□ 0.36
CLK3-225ENST00000569063 EGLN3Q9H6Z9 239 aa17.29■□□□□ 0.36
CLK3-225ENST00000569063 DECR2Q9NUI1 292 aa17.29■□□□□ 0.36
CLK3-225ENST00000569063 IL20Q9NYY1 176 aa17.29■□□□□ 0.36
CLK3-225ENST00000569063 CDH10Q9Y6N8 788 aa17.29■□□□□ 0.36
CLK3-225ENST00000569063 SONP18583 2426 aaKnown RBP17.28■□□□□ 0.36
CLK3-225ENST00000569063 PLSCR5A0PG75 271 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 OR6C68A6NDL8 312 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 ACOT8O14734 319 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 RER1O15258 196 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 IGHV1-46P01743 117 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 ADH4P08319 380 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 FAM157CP0CG43 387 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 CENPAP49450 140 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 TEKQ02763 1124 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 TRAP1Q12931 704 aaKnown RBP17.28■□□□□ 0.36
CLK3-225ENST00000569063 OR2T5Q6IEZ7 315 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 TRPM8Q7Z2W7 1104 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 GJC3Q8NFK1 279 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 SLC26A10Q8NG04 563 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 OR2T29Q8NH02 315 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 CLPTM1LQ96KA5 538 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 LRGUKQ96M69 825 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 BEX2Q9BXY8 128 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 SHARPINQ9H0F6 387 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 RPRD1BQ9NQG5 326 aaKnown RBP17.28■□□□□ 0.36
CLK3-225ENST00000569063 POLR1DQ9Y2S0 133 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 GRIP1Q9Y3R0 1128 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 LHFPL6Q9Y693 200 aa17.28■□□□□ 0.36
CLK3-225ENST00000569063 ABCA2Q9BZC7 2435 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 IGHV1-69-2A0A0G2JMI3 117 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 BHLHE40O14503 412 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 GSTM3P21266 225 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 IGFBP5P24593 272 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.27■□□□□ 0.36
CLK3-225ENST00000569063 COX10Q12887 443 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 PSG7Q13046 419 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 TSTQ16762 297 aaKnown RBP17.27■□□□□ 0.36
CLK3-225ENST00000569063 MEP1BQ16820 701 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 MICAQ29983 383 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 CLEC12AQ5QGZ9 265 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 RASSF6Q6ZTQ3 369 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 LINC01356Q8N9X3 169 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 SDR9C7Q8NEX9 313 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 OR52L1Q8NGH7 329 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 OR52E2Q8NGJ4 325 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 BCAS4Q8TDM0 211 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 SLC7A6Q92536 515 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 CCDC124Q96CT7 223 aaKnown RBP17.27■□□□□ 0.36
CLK3-225ENST00000569063 COG8Q96MW5 612 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 DCLRE1CQ96SD1 692 aaKnown RBP17.27■□□□□ 0.36
CLK3-225ENST00000569063 THTPAQ9BU02 230 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 REEP1Q9H902 201 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 SAP30LQ9HAJ7 183 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 ZDHHC8Q9ULC8 765 aa17.27■□□□□ 0.36
CLK3-225ENST00000569063 ZSCAN5BA6NJL1 495 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 J3QW42 95 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 PPIHO43447 177 aaKnown RBP17.26■□□□□ 0.35
CLK3-225ENST00000569063 SPRY3O43610 288 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 CDC14BO60729 498 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 IFNA2P01563 188 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 TFP02787 698 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 RAP2AP10114 183 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 CDH15P55291 814 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 PPP1R8Q12972 351 aaKnown RBP17.26■□□□□ 0.35
CLK3-225ENST00000569063 ZMAT1Q5H9K5 638 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 SLC35F1Q5T1Q4 408 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 AQP11Q8NBQ7 271 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 CLDND2Q8NHS1 167 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 DIRC2Q96SL1 478 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 DDOQ99489 341 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 COQ7Q99807 217 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 DGCR6LQ9BY27 220 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 HDHD2Q9H0R4 259 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 POFUT1Q9H488 388 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 VNN3Q9NY84 501 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 STARD10Q9Y365 291 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 SAMHD1Q9Y3Z3 626 aaKnown RBP17.26■□□□□ 0.35
CLK3-225ENST00000569063 U3KQV3 271 aa17.26■□□□□ 0.35
CLK3-225ENST00000569063 TPD52L2O43399 206 aaKnown RBP17.25■□□□□ 0.35
CLK3-225ENST00000569063 DBHP09172 617 aa17.25■□□□□ 0.35
CLK3-225ENST00000569063 KITLGP21583 273 aa17.25■□□□□ 0.35
CLK3-225ENST00000569063 RGS6P49758 472 aa17.25■□□□□ 0.35
CLK3-225ENST00000569063 DBPQ10586 325 aaPredicted RBP17.25■□□□□ 0.35
CLK3-225ENST00000569063 CCNIQ14094 377 aa17.25■□□□□ 0.35
CLK3-225ENST00000569063 GK3PQ14409 553 aa17.25■□□□□ 0.35
CLK3-225ENST00000569063 SLC36A3Q495N2 470 aa17.25■□□□□ 0.35
CLK3-225ENST00000569063 FAM120AOSQ5T036 256 aa17.25■□□□□ 0.35
CLK3-225ENST00000569063 ZNF362Q5T0B9 420 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms