RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 RGS6P49758 472 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 CRYBA2P53672 197 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 CTXN1P60606 82 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 ST3GAL3Q11203 375 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 TOP3AQ13472 1001 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 PIN1Q13526 163 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 KLBQ86Z14 1044 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 C1orf87Q8N0U7 546 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 PCYOX1LQ8NBM8 494 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 WFDC12Q8WWY7 111 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 ZDHHC16Q969W1 377 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 DACT3Q96B18 629 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 BPIFA2Q96DR5 249 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 MMP27Q9H306 513 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 TMEM165Q9HC07 324 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 TMBIM4Q9HC24 238 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 ATPIF1Q9UII2 106 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 HOXA3O43365 443 aaPredicted RBP13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 NDUFA7O95182 113 aa13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 GZMMP51124 257 aa13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 AQP6Q13520 282 aa13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 CYLC2Q14093 348 aaPredicted RBP13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 PDCD1Q15116 288 aa13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 GPR157Q5UAW9 335 aa13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 POU5F2Q8N7G0 328 aa13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 ATG16L2Q8NAA4 619 aa13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 OR8B3Q8NGG8 313 aa13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 OR5L1Q8NGL2 311 aa13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 OR13G1Q8NGZ3 307 aa13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 RASD2Q96D21 266 aa13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 FAM71F1Q96KD3 344 aaPredicted RBP13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 OR8B2Q96RD0 313 aa13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 CITED1Q99966 193 aa13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 KIF17Q9P2E2 1029 aa13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 POMT1Q9Y6A1 747 aa13.18□□□□□ -0.3
HERPUD1-215ENST00000568676 FAM181BA6NEQ2 426 aa13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 PHYHO14832 338 aa13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 SLC9A3P48764 834 aa13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 RAG2P55895 527 aa13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 TTMPQ5BVD1 217 aa13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 OLFML2AQ68BL7 652 aa13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 ERICH5Q6P6B1 374 aa13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 FBXW12Q6X9E4 464 aa13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 VASH1Q7L8A9 365 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 CLDN22Q8N7P3 220 aa13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 FAM156AQ8NDB6 213 aa13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 OR8G5Q8NG78 346 aa13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 OR10S1Q8NGN2 331 aa13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 CCT8L2Q96SF2 557 aa13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 SLC30A2Q9BRI3 323 aa13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 ARMCX1Q9P291 453 aa13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 STARD10Q9Y365 291 aa13.17□□□□□ -0.3
HERPUD1-215ENST00000568676 IGHV3OR16-10A0A075B7F0 116 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 IFI30P13284 250 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 OMGP23515 440 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 PITPNBP48739 271 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 DEFB112Q30KQ8 113 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 ZNF404Q494X3 552 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 NANOGP8Q6NSW7 305 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 BRICD5Q6PL45 260 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 Q6YL49 198 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 OAFQ86UD1 273 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 LRRC75AQ8NAA5 344 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 OR8J3Q8NGG0 315 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 ERGIC1Q969X5 290 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 MEGF10Q96KG7 1140 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 PRRC1Q96M27 445 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 ZNF582Q96NG8 517 aaPredicted RBP13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 ECSITQ9BQ95 431 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 NUDT16L1Q9BRJ7 211 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 TMEM246Q9BRR3 403 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 NDEL1Q9GZM8 345 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 POFUT1Q9H488 388 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 MRGBPQ9NV56 204 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 GRHPRQ9UBQ7 328 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 CLN8Q9UBY8 286 aa13.16□□□□□ -0.3
HERPUD1-215ENST00000568676 CLPSL1A2RUU4 121 aa13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 XKRYO14609 159 aa13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 NPPAP01160 153 aa13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 LIPFP07098 398 aa13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 TNFRSF1BP20333 461 aa13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 NPY4RP50391 375 aa13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 LSM6P62312 80 aaKnown RBP13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 FIP1L1Q6UN15 594 aaKnown RBP13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 DCDC5Q6ZRR9 648 aa13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 CALHM3Q86XJ0 350 aa13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 RNF113BQ8IZP6 322 aaKnown RBP13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 FITM2Q8N6M3 262 aa13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 KIR3DL3Q8N743 410 aa13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 CELF2-AS1Q8N7Q2 184 aa13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 C10orf82Q8WW14 230 aa13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 EMC7Q9NPA0 242 aa13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 C1RLQ9NZP8 487 aa13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 PDP1Q9P0J1 537 aaPredicted RBP13.15□□□□□ -0.3
HERPUD1-215ENST00000568676 TEX13CA0A0J9YWL9 993 aa13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 OR6C6A6NF89 314 aa13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 ENSAO43768 121 aaKnown RBP13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 CYB5R3P00387 301 aaPredicted RBP13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 IRF2P14316 349 aa13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 OR1E2P47887 323 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms