RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 FAM183AA6NL82 134 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 RIIAD1A6NNX1 92 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 G3V2T6 193 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 LY6HO94772 140 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 NGFP01138 241 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 IFNGP01579 166 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 ZNF250P15622 560 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 ZNF23P17027 643 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 ZNF3P17036 446 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 CCNOP22674 350 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 EPHA2P29317 976 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 RPS27P42677 84 aaKnown RBP8.41□□□□□ -1.06
CLK3-220ENST00000567992 HTR5AP47898 357 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 CENPAP49450 140 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 EVX1P49640 407 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 ARHGDIAP52565 204 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 CRISP1P54107 249 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 RPS23P62266 143 aaKnown RBP8.41□□□□□ -1.06
CLK3-220ENST00000567992 PCK2Q16822 640 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 RSPO1Q2MKA7 263 aaPredicted RBP8.41□□□□□ -1.06
CLK3-220ENST00000567992 TMEM236Q5W0B7 351 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 RGS7BPQ6MZT1 257 aaPredicted RBP8.41□□□□□ -1.06
CLK3-220ENST00000567992 CORO6Q6QEF8 472 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 LINC00346Q8IVM7 164 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 ALDH16A1Q8IZ83 802 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 OR10S1Q8NGN2 331 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 OR1F12Q8NHA8 337 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 PTP4A1Q93096 173 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 TRMT61AQ96FX7 289 aaKnown RBP8.41□□□□□ -1.06
CLK3-220ENST00000567992 MAP6Q96JE9 813 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 SYT3Q9BQG1 590 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 BCL2L14Q9BZR8 327 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 POFUT1Q9H488 388 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 WDR76Q9H967 626 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 HINT3Q9NQE9 182 aaKnown RBP8.41□□□□□ -1.06
CLK3-220ENST00000567992 PLEK2Q9NYT0 353 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 KIF17Q9P2E2 1029 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 ATPIF1Q9UII2 106 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 POLR1DQ9Y2S0 133 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 CMAHPQ9Y471 501 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 COMMD3-BMI1R4GMX3 469 aa8.41□□□□□ -1.06
CLK3-220ENST00000567992 ZFHX3Q15911 3703 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 SAC3D1A6NKF1 404 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 ATP6V1G2O95670 118 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 CLPTM1O96005 669 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 DBHP09172 617 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 SLC2A5P22732 501 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 MAD2L1BPQ15013 274 aaPredicted RBP8.4□□□□□ -1.06
CLK3-220ENST00000567992 PTGES3Q15185 160 aaKnown RBP8.4□□□□□ -1.06
CLK3-220ENST00000567992 CLEC12BQ2HXU8 276 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 ELFN2Q5R3F8 820 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 SPATA46Q5T0L3 261 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 ZFP1Q6P2D0 407 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 ZDHHC13Q8IUH4 622 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 ZCCHC24Q8N2G6 241 aaKnown RBP8.4□□□□□ -1.06
CLK3-220ENST00000567992 CIARTQ8N365 385 aaPredicted RBP8.4□□□□□ -1.06
CLK3-220ENST00000567992 ZNF511Q8NB15 262 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 BBS1Q8NFJ9 593 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 GJC3Q8NFK1 279 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 OR10H5Q8NGA6 315 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 OR1J1Q8NGS3 322 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 ABHD4Q8TB40 342 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 MARS2Q96GW9 593 aaKnown RBP8.4□□□□□ -1.06
CLK3-220ENST00000567992 COX4I2Q96KJ9 171 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 C4orf45Q96LM5 186 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 RAB3IPQ96QF0 476 aaPredicted RBP8.4□□□□□ -1.06
CLK3-220ENST00000567992 COQ7Q99807 217 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 CIB1Q99828 191 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 HDHD2Q9H0R4 259 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 MARCH7Q9H992 704 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 BARX1Q9HBU1 254 aaPredicted RBP8.4□□□□□ -1.06
CLK3-220ENST00000567992 KRT84Q9NSB2 600 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 KCNG2Q9UJ96 466 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 PMF1-BGLAPU3KQ54 211 aa8.4□□□□□ -1.06
CLK3-220ENST00000567992 A0A096LNT2 108 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 ZAR1LA6NP61 321 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 M0R129 80 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 SSX4O60224 188 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 IGHV3-13P01766 116 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 HLA-DQA2P01906 255 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 HMGN1P05114 100 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 LCKP06239 509 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 BMP4P12644 408 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 CD99P14209 185 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 ANOS1P23352 680 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 MPV17P39210 176 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 RAD52P43351 418 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 ALDH3B1P43353 468 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 ENTPD1P49961 510 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 EFNA4P52798 201 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 ESRRGP62508 458 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 EFNB1P98172 346 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 TNK1Q13470 666 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 TEX30Q5JUR7 227 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 SLX4IPQ5VYV7 408 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 MBNL2Q5VZF2 373 aaKnown RBP8.39□□□□□ -1.07
CLK3-220ENST00000567992 C12orf73Q69YU5 71 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 PLBD1Q6P4A8 553 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 ZNF525Q8N782 197 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 ICA1LQ8NDH6 482 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms