RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-215	ENST00000566682	SLC18B1	Q6NT16	456 aa		11.78	□□□□□ -0.52
SPG7-215	ENST00000566682	ZNF101	Q8IZC7	436 aa		11.78	□□□□□ -0.52
SPG7-215	ENST00000566682	ZNF511	Q8NB15	262 aa		11.78	□□□□□ -0.52
SPG7-215	ENST00000566682	WFDC11	Q8NEX6	87 aa		11.78	□□□□□ -0.52
SPG7-215	ENST00000566682	OR2AJ1	Q8NGZ0	328 aa		11.78	□□□□□ -0.52
SPG7-215	ENST00000566682	MRPL24	Q96A35	216 aa	Known RBP	11.78	□□□□□ -0.52
SPG7-215	ENST00000566682	DOK1	Q99704	481 aa		11.78	□□□□□ -0.52
SPG7-215	ENST00000566682	CIB1	Q99828	191 aa		11.78	□□□□□ -0.52
SPG7-215	ENST00000566682	TEX12	Q9BXU0	123 aa		11.78	□□□□□ -0.52
SPG7-215	ENST00000566682	MRPL37	Q9BZE1	423 aa	Known RBP	11.78	□□□□□ -0.52
SPG7-215	ENST00000566682	BCL2L14	Q9BZR8	327 aa		11.78	□□□□□ -0.52
SPG7-215	ENST00000566682	PLK3	Q9H4B4	646 aa		11.78	□□□□□ -0.52
SPG7-215	ENST00000566682	TVP23B	Q9NYZ1	205 aa		11.78	□□□□□ -0.52
SPG7-215	ENST00000566682	EIF3K	Q9UBQ5	218 aa	Known RBP	11.78	□□□□□ -0.52
SPG7-215	ENST00000566682	CYB5R1	Q9UHQ9	305 aa		11.78	□□□□□ -0.52
SPG7-215	ENST00000566682	GDF2	Q9UK05	429 aa	Predicted RBP	11.78	□□□□□ -0.52
SPG7-215	ENST00000566682	ANKRD65	E5RJM6	399 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	PRR23D1	E9PI22	279 aa	Predicted RBP	11.77	□□□□□ -0.53
SPG7-215	ENST00000566682		H7C417	338 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	PRR23D2	P0DMB1	279 aa	Predicted RBP	11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	PAICS	P22234	425 aa	Known RBP	11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	IGFBP5	P24593	272 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	RPS27	P42677	84 aa	Known RBP	11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	SNRPD2	P62316	118 aa	Known RBP	11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	RAB35	Q15286	201 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	SNAPC1	Q16533	368 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	ELFN2	Q5R3F8	820 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	LINC01590	Q5TEZ4	76 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	PLBD1	Q6P4A8	553 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	TMEM154	Q6P9G4	183 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	PRSS57	Q6UWY2	283 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	CFAP77	Q6ZQR2	320 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	LRP11	Q86VZ4	500 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	CPO	Q8IVL8	374 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	OR1J1	Q8NGS3	322 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	OR6K6	Q8NGW6	343 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	OR1F12	Q8NHA8	337 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	SLC7A6	Q92536	515 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	PLEKHA8	Q96JA3	519 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	C4orf45	Q96LM5	186 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	RBM4B	Q9BQ04	359 aa	Known RBP	11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	OR51V1	Q9H2C8	321 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	WDR76	Q9H967	626 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	HINT3	Q9NQE9	182 aa	Known RBP	11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	ENOPH1	Q9UHY7	261 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	KCNG2	Q9UJ96	466 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	FZR1	Q9UM11	496 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	COMMD3-BMI1	R4GMX3	469 aa		11.77	□□□□□ -0.53
SPG7-215	ENST00000566682	CHD3	Q12873	2000 aa	Known RBP	11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	OTOG	Q6ZRI0	2925 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	OR6C6	A6NF89	314 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	ZAR1L	A6NP61	321 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	ZNF593	O00488	134 aa	Predicted RBP	11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	ICMT	O60725	284 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	GLCE	O94923	617 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	NGF	P01138	241 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	IGHV4-39	P01824	125 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	PSKH1	P11801	424 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	POLR2I	P36954	125 aa	Known RBP	11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	EVX1	P49640	407 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	BLVRA	P53004	296 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	SLX4IP	Q5VYV7	408 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	ARL9	Q6T311	187 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	UNQ6126/PRO20091	Q6UXV3	157 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	TGIF2LY	Q8IUE0	185 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	PQLC1	Q8N2U9	271 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	MAP6	Q96JE9	813 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	VRK1	Q99986	396 aa	Predicted RBP	11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	SYT3	Q9BQG1	590 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	HDHD2	Q9H0R4	259 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	ELOVL3	Q9HB03	270 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	ATPIF1	Q9UII2	106 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	DUSP13	Q9UII6	198 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	GRIP1	Q9Y3R0	1128 aa		11.76	□□□□□ -0.53
SPG7-215	ENST00000566682	EI24	O14681	340 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	PRODH	O43272	600 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	CLPTM1	O96005	669 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	ALPL	P05186	524 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	DBH	P09172	617 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	ZNF250	P15622	560 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	ENTPD1	P49961	510 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	PCK2	Q16822	640 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	KLHL12	Q53G59	568 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	TEX30	Q5JUR7	227 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	RFPL4B	Q6ZWI9	263 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	CXXC5	Q7LFL8	322 aa	Known RBP	11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	C1orf174	Q8IYL3	243 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	BBS1	Q8NFJ9	593 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	ABHD4	Q8TB40	342 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	SYNPR	Q8TBG9	265 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	SLC25A40	Q8TBP6	338 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	STMN2	Q93045	179 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	PITX2	Q99697	317 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	COQ7	Q99807	217 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	PNRC2	Q9NPJ4	139 aa	Known RBP	11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	TBCCD1	Q9NVR7	557 aa		11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	MYEF2	Q9P2K5	600 aa	Known RBP	11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	FBXO9	Q9UK97	447 aa	Predicted RBP	11.75	□□□□□ -0.53
SPG7-215	ENST00000566682	IGLV3-9	A0A075B6K5	115 aa		11.74	□□□□□ -0.53

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