RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 FBLN5Q9UBX5 448 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 SH3GLB1Q9Y371 365 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 PLXNB1O43157 2135 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 AQP12BA6NM10 295 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 ZNF726A6NNF4 738 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 P2RY10O00398 339 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 ARPC2O15144 300 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 AHSA1O95433 338 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 SNAP29O95721 258 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 SERPINA1P01009 418 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 IGHV4-59P01825 116 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 CD55P08174 381 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 CCL2P13500 99 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 TNFRSF1AP19438 455 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 TNFSF4P23510 183 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 CRYBA2P53672 197 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 FGF12P61328 243 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 ERVS71-1P61550 626 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 PLAURQ03405 335 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 PLP2Q04941 152 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 OR1Q1Q15612 314 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 ZMAT1Q5H9K5 638 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 TMEM53Q6P2H8 277 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 C11orf88Q6PI97 169 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 CYP4Z1Q86W10 505 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 SKA3Q8IX90 412 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 AQP12AQ8IXF9 295 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 PAQR4Q8N4S7 273 aaPredicted RBP7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 ZNF283Q8N7M2 679 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 GPR32P1Q8NGA4 272 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 OR6N1Q8NGY5 312 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 TPD52L3Q96J77 140 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 SAMD8Q96LT4 415 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 LRGUKQ96M69 825 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 FOXB1Q99853 325 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 B9D2Q9BPU9 175 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 CADM1Q9BY67 442 aaKnown RBP7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 ZNF224Q9NZL3 707 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 EIF3KQ9UBQ5 218 aaKnown RBP7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 CGGBP1Q9UFW8 167 aaPredicted RBP7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 MIOXQ9UGB7 285 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 FAM32AQ9Y421 112 aaKnown RBP7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 DOCK11Q5JSL3 2073 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 TENM2Q9NT68 2774 aa7.54□□□□□ -1.2
VPS9D1-205ENST00000565452 A0A087WUJ7 227 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 IQCMA0A1B0GVH7 501 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 TRAPPC13A5PLN9 417 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 BTBD17A6NE02 478 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 ACOT8O14734 319 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 CHP2O43745 196 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 OR2T1O43869 369 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 NPIPB7O75200 414 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 OR5F1O95221 314 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 FARS2O95363 451 aaKnown RBP7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 ZNF682O95780 498 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 IGF2P01344 180 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 OPN1SWP03999 348 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 IFNW1P05000 195 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 NHLRC4P0CG21 123 aaPredicted RBP7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 PRG2P13727 222 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 NCK1P16333 377 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 RHCEP18577 417 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 SMIM11AP58511 58 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 TNFAIP6P98066 277 aaPredicted RBP7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 ST3GAL3Q11203 375 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 CDK5R2Q13319 367 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 ZMYND11Q15326 602 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 ALG10BQ5I7T1 473 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 ENTPD8Q5MY95 495 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 THEM4Q5T1C6 240 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 SLC35E4Q6ICL7 350 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 SLC27A4Q6P1M0 643 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 LINC00114Q6XXX2 140 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 H1FNTQ75WM6 255 aaPredicted RBP7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 ASRGL1Q7L266 308 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 DPPA2Q7Z7J5 298 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 HMGN2P46Q86SG4 172 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 UEVLDQ8IX04 471 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 CADM2Q8N3J6 435 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 SPERTQ8NA61 448 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 FAM156AQ8NDB6 213 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 OR6T1Q8NGN1 323 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 OR6S1Q8NH40 331 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 ADAMTS16Q8TE57 1224 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 ITPKCQ96DU7 683 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 ZNF347Q96SE7 839 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 EPYCQ99645 322 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 PCGF1Q9BSM1 259 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 TMEM43Q9BTV4 400 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 ULBP2Q9BZM5 246 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 ANKRD19PQ9H560 264 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 MAGIXQ9H6Y5 334 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 YY1AP1Q9H869 796 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 IL1RAPQ9NPH3 570 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 DCAF16Q9NXF7 216 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 FAM96BQ9Y3D0 163 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 PCDHGB5Q9Y5G0 923 aa7.53□□□□□ -1.2
VPS9D1-205ENST00000565452 A0A0B4J2E0 115 aa7.52□□□□□ -1.21
VPS9D1-205ENST00000565452 CENPVL3A0A0U1RRI6 287 aa7.52□□□□□ -1.21
VPS9D1-205ENST00000565452 A0A1B0GWA3 101 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms