RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 C1orf198Q9H425 327 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 CYSLTR2Q9NS75 346 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 TMEM106BQ9NUM4 274 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 TMEM140Q9NV12 185 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 ZDHHC8Q9ULC8 765 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 POMT1Q9Y6A1 747 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 DNAH3Q8TD57 4116 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 TRAV36DV7A0A075B6V5 113 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 A0A087WUJ7 227 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 IGHV2-70DA0A0C4DH43 119 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 LOC100653049A0A140TA62 436 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 KIR2DS1A0A191URI9 304 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 CEACAM18A8MTB9 384 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 H0YL77 283 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 DHHO43323 396 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 ENTPD5O75356 428 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 E2F6O75461 281 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 RBMXL2O75526 392 aaKnown RBP4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 KRT34O76011 436 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 MFN2O95140 757 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 FARS2O95363 451 aaKnown RBP4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 IGHV4-59P01825 116 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 AMY1AP04745 511 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 WNT2P09544 360 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 RPS2P15880 293 aaKnown RBP4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 RPS4Y1P22090 263 aaKnown RBP4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 AHCYP23526 432 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 APLNRP35414 380 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 LIPAP38571 399 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 MPV17P39210 176 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 CSNK1A1P48729 337 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 ANXA11P50995 505 aaKnown RBP4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 BPIFB3P59826 476 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 BTG1P62324 171 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 GNB2P62879 340 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 TNFAIP6P98066 277 aaPredicted RBP4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 PAX2Q02962 417 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 LARS2Q15031 903 aaKnown RBP4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 SLC36A2Q495M3 483 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 LIN52Q52LA3 116 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 XKR7Q5GH72 579 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 FAM69AQ5T7M9 428 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 ANXA8L1Q5VT79 327 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 CCBE1Q6UXH8 406 aaPredicted RBP4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 WDR88Q6ZMY6 472 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 Q6ZSV7 163 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 SLC16A14Q7RTX9 510 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 SERPINA11Q86U17 422 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 LRRC34Q8IZ02 419 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 LNX2Q8N448 690 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 ZSCAN4Q8NAM6 433 aaPredicted RBP4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 OR4K5Q8NGD3 323 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 SLC25A40Q8TBP6 338 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 KLF14Q8TD94 323 aaPredicted RBP4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 SLC38A4Q969I6 547 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 TUBGCP3Q96CW5 907 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 RSRC1Q96IZ7 334 aaKnown RBP4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 MPP4Q96JB8 637 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 ARHGDIGQ99819 225 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 NUDT16L1Q9BRJ7 211 aaKnown RBP4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 PCGF1Q9BSM1 259 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 SLC19A3Q9BZV2 496 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 OR2J1Q9GZK6 312 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 ARMC7Q9H6L4 198 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 TCF7L2Q9NQB0 619 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 NECAP2Q9NVZ3 263 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 C14orf119Q9NWQ9 140 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 ZNF446Q9NWS9 450 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 GLTPQ9NZD2 209 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 PSMC3IPQ9P2W1 217 aaPredicted RBP4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 EIF3KQ9UBQ5 218 aaKnown RBP4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 RPS6KB2Q9UBS0 482 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 PPP1R3CQ9UQK1 317 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 LRCH1Q9Y2L9 728 aa4.28□□□□□ -1.72
TUBGCP4-209ENST00000564511 ZNF816-ZNF321PA0A0X1KG74 233 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 C5orf49A4QMS7 147 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 CCDC154A6NI56 674 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 LRRN3E7EW58 273 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 F5H0A9 414 aaPredicted RBP4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 COPEO14579 308 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 TNFRSF13BO14836 293 aaPredicted RBP4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 SCGB1D2O95969 90 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 CD55P08174 381 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 THRBP10828 461 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 TNFSF4P23510 183 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 STOMP27105 288 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 MDH2P40926 338 aaKnown RBP4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 MTNR1BP49286 362 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 BIDP55957 195 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 FGF12P61328 243 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 HSF2Q03933 536 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 EMX2Q04743 252 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 PUDPQ08623 228 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 BST1Q10588 318 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 MAD2L1Q13257 205 aaPredicted RBP4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 CASP8Q14790 479 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 KRT72Q14CN4 511 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 PCLAFQ15004 111 aa4.27□□□□□ -1.73
TUBGCP4-209ENST00000564511 RUNDC3AQ59EK9 446 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms