RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 OPN1MW2P0DN77 364 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 OPN1MW3P0DN78 364 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 VSIG8P0DPA2 414 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 ACADSP16219 412 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 FUT1P19526 365 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 CD247P20963 164 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 FUT4P22083 530 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 LAP3P28838 519 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 AQP1P29972 269 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 LIPAP38571 399 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 PSMB10P40306 273 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 IER3P46695 156 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 PITPNBP48739 271 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 GDI2P50395 445 aaKnown RBP8.57□□□□□ -1.04
SF3B3-204ENST00000563739 CLRN1P58418 232 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 GNB2P62879 340 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 CDK6Q00534 326 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 AGKQ53H12 422 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 PAGE3Q5JUK9 113 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 ENTPD8Q5MY95 495 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 GCNT6Q5T4J0 391 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 FAM27BQ5VT28 67 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 REEP3Q6NUK4 255 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 ZNF613Q6PF04 617 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 BLOC1S3Q6QNY0 202 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 RANBP3LQ86VV4 465 aaPredicted RBP8.57□□□□□ -1.04
SF3B3-204ENST00000563739 MUC20Q8N307 709 aaPredicted RBP8.57□□□□□ -1.04
SF3B3-204ENST00000563739 SMYD1Q8NB12 490 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 C19orf18Q8NEA5 215 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 OR10AD1Q8NGE0 317 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 PFN4Q8NHR9 129 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 SLC7A6Q92536 515 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 SPDL1Q96EA4 605 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 NEIL1Q96FI4 390 aaPredicted RBP8.57□□□□□ -1.04
SF3B3-204ENST00000563739 ITCHQ96J02 903 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 C4orf45Q96LM5 186 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 MCHR1Q99705 422 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 SEMA6AQ9H2E6 1030 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 LRMDAQ9H2I8 198 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 RMND5AQ9H871 391 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 TMEM27Q9HBJ8 222 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 SMURF1Q9HCE7 757 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 C20orf141Q9NUB4 165 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 AURKAIP1Q9NWT8 199 aaPredicted RBP8.57□□□□□ -1.04
SF3B3-204ENST00000563739 VAPAQ9P0L0 249 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 ARL2BPQ9Y2Y0 163 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 STARD10Q9Y365 291 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 RRP15Q9Y3B9 282 aaKnown RBP8.57□□□□□ -1.04
SF3B3-204ENST00000563739 HUWE1Q7Z6Z7 4374 aaKnown RBP8.57□□□□□ -1.04
SF3B3-204ENST00000563739 LOC100653049A0A140TA62 436 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 ENTPD5O75356 428 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 TSPAN9O75954 239 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 KRT34O76011 436 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 ANP32DO95626 131 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 FSTL3O95633 263 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 CST2P09228 141 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 ANOS1P23352 680 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 AQP2P41181 271 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 ZNF84P51523 738 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 DBPQ10586 325 aaPredicted RBP8.56□□□□□ -1.04
SF3B3-204ENST00000563739 FHL1Q13642 323 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 PDCD1Q15116 288 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 FAM189A2Q15884 450 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 C2orf68Q2NKX9 166 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 RUNDC3AQ59EK9 446 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 ZMAT1Q5H9K5 638 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 CLEC12AQ5QGZ9 265 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 C6orf10Q5SRN2 563 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 OTPQ5XKR4 325 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 SLC27A4Q6P1M0 643 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 BTNL3Q6UXE8 466 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 CCDC121Q6ZUS5 278 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 C1orf174Q8IYL3 243 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 FGFRL1Q8N441 504 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 HIPK4Q8NE63 616 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 ADAMTS16Q8TE57 1224 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 SSMEM1Q8WWF3 244 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 NSMAFQ92636 917 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 CMBLQ96DG6 245 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 FAM71F1Q96KD3 344 aaPredicted RBP8.56□□□□□ -1.04
SF3B3-204ENST00000563739 CPPED1Q9BRF8 314 aaPredicted RBP8.56□□□□□ -1.04
SF3B3-204ENST00000563739 PCDHAC1Q9H158 963 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 RAD21L1Q9H4I0 556 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 TMEM38AQ9H6F2 299 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 SMURF2Q9HAU4 748 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 SAR1AQ9NR31 198 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 NANSQ9NR45 359 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 MRGBPQ9NV56 204 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 SLC7A7Q9UM01 511 aa8.56□□□□□ -1.04
SF3B3-204ENST00000563739 HYDINQ4G0P3 5121 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 IGHV1-69DA0A0B4J2H0 117 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 NPIPB13A6NJU9 1138 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 NPIPB4C9JG80 1138 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 PHYHO14832 338 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 IGHV1-69P01742 117 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 TNFRSF1AP19438 455 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 SLC6A2P23975 617 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 RAD23AP54725 363 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 NCALDP61601 193 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 EGR3Q06889 387 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms