RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 CDK5R1Q15078 307 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 CYB5R2Q6BCY4 276 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 TBC1D3CQ6IPX1 549 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 TBC1D3Q8IZP1 549 aaPredicted RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 MRGPRDQ8TDS7 321 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 NUP205Q92621 2012 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 PRRX2Q99811 253 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 PRSS16Q9NQE7 514 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 KCND3Q9UK17 655 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 TEX50A0A1B0GTY4 177 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 SMIM35A0A1B0GVV1 85 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 LILRB3O75022 631 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 CDC34P49427 236 aaPredicted RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 PLP1P60201 277 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 SYPL1Q16563 259 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 NHLRC1Q6VVB1 395 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 ZFP62Q8NB50 900 aaPredicted RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 PEX11GQ96HA9 241 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 WDR76Q9H967 626 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 NECAP2Q9NVZ3 263 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 KLK11Q9UBX7 282 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 A0A087WWC5 75 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 OR2A4O95047 310 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 CSTAP01040 98 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 NRASP01111 189 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 HRASP01112 189 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 KRASP01116 189 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 MUC1P15941 1255 aaPredicted RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 HOXB9P17482 250 aaPredicted RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 RPS12P25398 132 aaKnown RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 CNN1P51911 297 aaKnown RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 SNRPNP63162 240 aaKnown RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 FOXK2Q01167 660 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 RING1Q06587 406 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 SLC8B1Q6J4K2 584 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 ZNF761Q86XN6 746 aaPredicted RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 OR4K14Q8NGD5 310 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 OR2A7Q96R45 310 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 ZNF430Q9H8G1 570 aaPredicted RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 ABT1Q9ULW3 272 aaKnown RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 FLVCR1Q9Y5Y0 555 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 RGPD8O14715 1765 aaPredicted RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 RGPD5Q99666 1765 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 AQP7P3A6NL99 342 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 SLC16A7O60669 478 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 IGHA2P01877 340 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 CLDN12P56749 244 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 ERVS71-1P61550 626 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 CLN3Q13286 438 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 ZNF789Q5FWF6 425 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 ZNF343Q6P1L6 599 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 NXPE4Q6UWF7 544 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 PPTC7Q8NI37 304 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 ISG20Q96AZ6 181 aaKnown RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 ST6GALNAC5Q9BVH7 336 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 SERTAD4Q9NUC0 356 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 PEF1Q9UBV8 284 aaKnown RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 OR5V1Q9UGF6 321 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 NSG1A0A0A6YYJ2 146 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 M0R2Z0 102 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 MPIG6BO95866 241 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 FPR2P25090 351 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 ACTR1BP42025 376 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 TMEM220Q6QAJ8 160 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 TMEM184AQ6ZMB5 413 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 LRP11Q86VZ4 500 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 ZNF547Q8IVP9 402 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 NUBPLQ8TB37 319 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 TMEM37Q8WXS4 190 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 ABHD1Q96SE0 405 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 FIGNL2A6NMB9 653 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 HHLA1C9JL84 531 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 CYB5R3P00387 301 aaPredicted RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 TBC1D3HP0C7X1 549 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 MGST1P10620 155 aaKnown RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 ACKR3P25106 362 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 ZXDBP98169 803 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 FZD2Q14332 565 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 HYAL4Q2M3T9 481 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 RAB6CQ53S08 254 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 OR51A4Q8NGJ6 313 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 OR5B2Q96R09 309 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 RAB6CQ9H0N0 254 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 MANBALQ9NQG1 85 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 TBX21Q9UL17 535 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 FOCADQ5VW36 1801 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 RRP8O43159 456 aaKnown RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 SOX15O60248 233 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 CFDP00746 253 aaPredicted RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 LMO2P25791 158 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 PGGT1BP53609 377 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 CRYBB1P53674 252 aaPredicted RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 FAM3AP98173 230 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 HABP2Q14520 560 aaPredicted RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 IHHQ14623 411 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 PAQR6Q6TCH4 344 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 TPRG1Q6ZUI0 275 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 CBARPQ8N350 705 aaPredicted RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 SLC46A1Q96NT5 459 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 DMRT3Q9NQL9 472 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms