RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 MLF1P58340 268 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 TPI1P60174 286 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 SNRPD1P62314 119 aaKnown RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 CCL7P80098 99 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 LCN2P80188 198 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 IL10RBQ08334 325 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 EXOSC2Q13868 293 aaKnown RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 KRT81Q14533 505 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 OPCMLQ14982 345 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 CYTH1Q15438 398 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 COX19Q49B96 90 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 PAN3Q58A45 887 aaKnown RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 OR2G6Q5TZ20 316 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 LIPKQ5VXJ0 399 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 METTL21CQ5VZV1 264 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 UGT3A1Q6NUS8 523 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 ULK3Q6PHR2 472 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 DOK6Q6PKX4 331 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 TMPRSS11AQ6ZMR5 421 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 GCNT7Q6ZNI0 430 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 RANBP3LQ86VV4 465 aaPredicted RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 NAXDQ8IW45 347 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 KIRREL3Q8IZU9 778 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 SLC22A18ASQ8N1D0 253 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 TMEM156Q8N614 296 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 CATSPER1Q8NEC5 780 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 B3GNT7Q8NFL0 401 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 OR7A2PQ8NGA2 310 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 OR2AP1Q8NGE2 309 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 OR8K1Q8NGG5 319 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 OR2D3Q8NGH3 330 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 OR6K2Q8NGY2 324 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 OR2V1Q8NHB1 315 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 WDR36Q8NI36 951 aaKnown RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 PIH1D2Q8WWB5 315 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 HIST1H2ACQ93077 130 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 C10orf35Q96D05 121 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 CELF6Q96J87 481 aaKnown RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 CCDC42Q96M95 316 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 OR5B2Q96R09 309 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 KLF6Q99612 283 aaPredicted RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 COPS8Q99627 209 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 MAPKAP1Q9BPZ7 522 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 RSG1Q9BU20 258 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 MCRIP2Q9BUT9 160 aaKnown RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 MAP1LC3CQ9BXW4 147 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 GSDMCQ9BYG8 508 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 GBA3Q9H227 469 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 IL1RL2Q9HB29 575 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 HRASLSQ9HDD0 168 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 RAB9BQ9NP90 201 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 NECAP2Q9NVZ3 263 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 EIF3KQ9UBQ5 218 aaKnown RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 CIDEBQ9UHD4 219 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 PSORS1C1Q9UIG5 152 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 ANAPC7Q9UJX3 599 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 STARD10Q9Y365 291 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 TSSC4Q9Y5U2 329 aaPredicted RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 MRPS18BQ9Y676 258 aaKnown RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 ASPMQ8IZT6 3477 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 MYO18AQ92614 2054 aaKnown RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 PTPRZ1P23471 2315 aaPredicted RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 ZZEF1O43149 2961 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 RALGAPA1Q6GYQ0 2036 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 ZFHX4Q86UP3 3567 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 SPEGQ15772 3267 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 WDFY3Q8IZQ1 3526 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 SLC5A10A0PJK1 596 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 DFFAO00273 331 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 SLC31A1O15431 190 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 XRCC2O43543 280 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 MFSD11O43934 449 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 ENTPD5O75356 428 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 OR2J3O76001 311 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 ANP32DO95626 131 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 IGSF6O95976 241 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 CD48P09326 243 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 OCM2P0CE71 109 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 CCDC166P0CW27 439 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 NR2C1P13056 603 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 ATP1B2P14415 290 aaPredicted RBP3.47□□□□□ -1.85
LRRC28-222ENST00000561431 PGAM1P18669 254 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 KDELR2P33947 212 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 TIMP3P35625 211 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 CYLC1P35663 651 aaPredicted RBP3.47□□□□□ -1.85
LRRC28-222ENST00000561431 NUDT1P36639 197 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 ACVR1BP36896 505 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 NKX2-1P43699 371 aaPredicted RBP3.47□□□□□ -1.85
LRRC28-222ENST00000561431 GLIPR1P48060 266 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 RGS6P49758 472 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 DNA2P51530 1060 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 NKX2-5P52952 324 aaPredicted RBP3.47□□□□□ -1.85
LRRC28-222ENST00000561431 PLA2G16P53816 162 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 ERVK11-1P61568 191 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 RHOAP61586 193 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 NAAAQ02083 359 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 C2orf54Q08AI8 447 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 PDIA2Q13087 525 aaKnown RBP3.47□□□□□ -1.85
LRRC28-222ENST00000561431 DPYSL3Q14195 570 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms