RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 BBS1Q8NFJ9 593 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 OR1J2Q8NGS2 313 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 OR1J1Q8NGS3 322 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 OR1F12Q8NHA8 337 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 SLC25A40Q8TBP6 338 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 MARS2Q96GW9 593 aaKnown RBP11.91□□□□□ -0.5
TPM1-230ENST00000561266 C4orf45Q96LM5 186 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 VRK1Q99986 396 aaPredicted RBP11.91□□□□□ -0.5
TPM1-230ENST00000561266 TPK1Q9H3S4 243 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 PLEK2Q9NYT0 353 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 CYB5R1Q9UHQ9 305 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 DUSP13Q9UII6 198 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 KLHL21Q9UJP4 597 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 BAIAP2Q9UQB8 552 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 SPEF1Q9Y4P9 236 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 PMF1-BGLAPU3KQ54 211 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 IGLV3-9A0A075B6K5 115 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 A0A096LNT2 108 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 C5orf63A6NC05 138 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 RNF223E7ERA6 249 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 G3V2T6 193 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 M0R129 80 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 SMAD7O15105 426 aaKnown RBP11.9□□□□□ -0.5
TPM1-230ENST00000561266 SURF4O15260 269 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 ICMTO60725 284 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 F12P00748 615 aaPredicted RBP11.9□□□□□ -0.5
TPM1-230ENST00000561266 HLA-DQA2P01906 255 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 COX5BP10606 129 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 NAT2P11245 290 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 POLR2IP36954 125 aaKnown RBP11.9□□□□□ -0.5
TPM1-230ENST00000561266 PPOXP50336 477 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 EFNA4P52798 201 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 CRISP1P54107 249 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 GLO1Q04760 184 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 SCRN3Q0VDG4 424 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 HNRNPA0Q13151 305 aaKnown RBP11.9□□□□□ -0.5
TPM1-230ENST00000561266 KRTAP27-1Q3LI81 207 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 KDM4DQ6B0I6 523 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 SLC27A4Q6P1M0 643 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 ALDH16A1Q8IZ83 802 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 PROKR2Q8NFJ6 384 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 OR10H5Q8NGA6 315 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 OR2T4Q8NH00 348 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 ABHD4Q8TB40 342 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 COX4I2Q96KJ9 171 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 WACQ9BTA9 647 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 OR2J1Q9GZK6 312 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 GABARAPL1Q9H0R8 117 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 SLC25A19Q9HC21 320 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 HINT3Q9NQE9 182 aaKnown RBP11.9□□□□□ -0.5
TPM1-230ENST00000561266 PAPOLBQ9NRJ5 636 aaKnown RBP11.9□□□□□ -0.5
TPM1-230ENST00000561266 OAZ3Q9UMX2 235 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 STARD10Q9Y365 291 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 COMMD3-BMI1R4GMX3 469 aa11.9□□□□□ -0.5
TPM1-230ENST00000561266 SAC3D1A6NKF1 404 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 LYNX1G3V0Z9 82 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 LYNX1P0DP58 116 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 ZNF23P17027 643 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 RBMXP38159 391 aaKnown RBP11.89□□□□□ -0.51
TPM1-230ENST00000561266 RAD52P43351 418 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 EVX1P49640 407 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 NUDT6P53370 316 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 PPP1CBP62140 327 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 SPRNQ5BIV9 151 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 ELFN2Q5R3F8 820 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 PLBD1Q6P4A8 553 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 BCDIN3DQ7Z5W3 292 aaKnown RBP11.89□□□□□ -0.51
TPM1-230ENST00000561266 HIPK1Q86Z02 1210 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 CPOQ8IVL8 374 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 SYNPRQ8TBG9 265 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 KLF14Q8TD94 323 aaPredicted RBP11.89□□□□□ -0.51
TPM1-230ENST00000561266 IPCEF1Q8WWN9 437 aaPredicted RBP11.89□□□□□ -0.51
TPM1-230ENST00000561266 CENPNQ96H22 339 aaPredicted RBP11.89□□□□□ -0.51
TPM1-230ENST00000561266 BDH2Q9BUT1 245 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 ZNF556Q9HAH1 456 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 TAAR3PQ9P1P4 343 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 POLR1DQ9Y2S0 133 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 GRIP1Q9Y3R0 1128 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 ABCA1O95477 2261 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 TLN2Q9Y4G6 2542 aa11.89□□□□□ -0.51
TPM1-230ENST00000561266 RIIAD1A6NNX1 92 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 NCR1O76036 304 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 HPXP02790 462 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 INHBBP09529 407 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 SLC2A5P22732 501 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 ARHGDIAP52565 204 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 PRSS12P56730 875 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 RPS23P62266 143 aaKnown RBP11.88□□□□□ -0.51
TPM1-230ENST00000561266 KRTAP1-1Q07627 177 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 PTGES3Q15185 160 aaKnown RBP11.88□□□□□ -0.51
TPM1-230ENST00000561266 PCK2Q16822 640 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 Q71RC1 249 aaPredicted RBP11.88□□□□□ -0.51
TPM1-230ENST00000561266 PARP8Q8N3A8 854 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 GJC3Q8NFK1 279 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 OTULINQ96BN8 352 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 C18orf12Q96KH6 178 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 AMELYQ99218 206 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 CIB1Q99828 191 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 BCL2L14Q9BZR8 327 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 OR51V1Q9H2C8 321 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms