RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 THRBP10828 461 aa14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 KITLGP21583 273 aa14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 LAP3P28838 519 aa14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 PCBP3P57721 371 aaKnown RBP14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 HDXQ7Z353 690 aa14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 REC114Q7Z4M0 266 aa14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 C1orf87Q8N0U7 546 aa14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 FITM2Q8N6M3 262 aa14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 ZNF420Q8TAQ5 688 aaPredicted RBP14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 GATAD2BQ8WXI9 593 aa14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 COG8Q96MW5 612 aa14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 CPPED1Q9BRF8 314 aaPredicted RBP14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 TMEM246Q9BRR3 403 aa14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 MRGBPQ9NV56 204 aa14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 TBCCD1Q9NVR7 557 aa14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 TET2Q6N021 2002 aaPredicted RBP14.85□□□□□ -0.03
TSPAN3-208ENST00000560514 TRAPPC13A5PLN9 417 aa14.85□□□□□ -0.03
TSPAN3-208ENST00000560514 TNFRSF13BO14836 293 aaPredicted RBP14.85□□□□□ -0.03
TSPAN3-208ENST00000560514 PIP5K1CO60331 668 aa14.85□□□□□ -0.03
TSPAN3-208ENST00000560514 SRP9P49458 86 aaKnown RBP14.85□□□□□ -0.03
TSPAN3-208ENST00000560514 GUCY1A3Q02108 690 aa14.85□□□□□ -0.03
TSPAN3-208ENST00000560514 FMODQ06828 376 aa14.85□□□□□ -0.03
TSPAN3-208ENST00000560514 NPTX1Q15818 432 aa14.85□□□□□ -0.03
TSPAN3-208ENST00000560514 OR6T1Q8NGN1 323 aa14.85□□□□□ -0.03
TSPAN3-208ENST00000560514 DACT3Q96B18 629 aaPredicted RBP14.85□□□□□ -0.03
TSPAN3-208ENST00000560514 RBP7Q96R05 134 aa14.85□□□□□ -0.03
TSPAN3-208ENST00000560514 CGREF1Q99674 301 aa14.85□□□□□ -0.03
TSPAN3-208ENST00000560514 TRIM15Q9C019 465 aa14.85□□□□□ -0.03
TSPAN3-208ENST00000560514 NBEAL2Q6ZNJ1 2754 aa14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 C12orf71A8MTZ7 269 aa14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 G3V4G9 280 aa14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 M0QX08 132 aa14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 P2RY10O00398 339 aa14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 ANGPT2O15123 496 aa14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 IRF2P14316 349 aa14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 FUT1P19526 365 aa14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 AQP2P41181 271 aa14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 FAM189A2Q15884 450 aa14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 DUSP7Q16829 419 aa14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 BEAN1Q3B7T3 259 aa14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 ZNF404Q494X3 552 aa14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 PATL1Q86TB9 770 aaKnown RBP14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 FNDC8Q8TC99 324 aa14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 HDAC2Q92769 488 aaKnown RBP14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 HAVCR1Q96D42 359 aa14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 KAT8Q9H7Z6 458 aaKnown RBP14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 ACOXLQ9NUZ1 547 aa14.84□□□□□ -0.03
TSPAN3-208ENST00000560514 IGKV1D-43A0A0B4J1Z2 117 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 A0A1W2PPL8 197 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 PHYHO14832 338 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 TOX4O94842 621 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 CD247P20963 164 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 HTR5AP47898 357 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 ARMC4Q5T2S8 1044 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 INTS11Q5TA45 600 aaKnown RBP14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 WDR25Q64LD2 544 aaPredicted RBP14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 SLC25A47Q6Q0C1 308 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 GDPGP1Q6ZNW5 385 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 Q6ZPA2 131 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 DHDDSQ86SQ9 333 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 SYT9Q86SS6 491 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 OR5AS1Q8N127 324 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 SCCPDHQ8NBX0 429 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 RASSF5Q8WWW0 418 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 LRTOMTQ8WZ04 291 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 PTP4A1Q93096 173 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 MEGF10Q96KG7 1140 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 ALG12Q9BV10 488 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 DPAGT1Q9H3H5 408 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 POFUT1Q9H488 388 aa14.83□□□□□ -0.04
TSPAN3-208ENST00000560514 OR7A10O76100 309 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 PRB2P02812 416 aaPredicted RBP14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 MT-ND1P03886 318 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 OPN1SWP03999 348 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 THY1P04216 161 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 LIPFP07098 398 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 MSR1P21757 451 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 TOP3AQ13472 1001 aaPredicted RBP14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 CYP51A1Q16850 503 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 CD276Q5ZPR3 534 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 C1orf94Q6P1W5 598 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 DCDC5Q6ZRR9 648 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 MOGAT3Q86VF5 341 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 OR10AD1Q8NGE0 317 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 OR13G1Q8NGZ3 307 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 MRAPQ8TCY5 172 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 SGTBQ96EQ0 304 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 TECTBQ96PL2 329 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 SH3GL1Q99961 368 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 ZNF426Q9BUY5 554 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 CDADC1Q9BWV3 514 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 PCDHAC1Q9H158 963 aa14.82□□□□□ -0.04
TSPAN3-208ENST00000560514 BTBD17A6NE02 478 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 DOK2O60496 412 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 EDF1O60869 148 aaKnown RBP14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 LYPD3O95274 346 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 FSTL3O95633 263 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 NPPAP01160 153 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 IGHV4-59P01825 116 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 SFTPBP07988 381 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms