RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ZNF620Q6ZNG0 422 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 MDP1Q86V88 176 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 C20orf196Q8IYI0 205 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 TCEANCQ8N8B7 351 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 FANK1Q8TC84 345 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 TMEM255BQ8WV15 326 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 TMEM43Q9BTV4 400 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 TSSK6Q9BXA6 273 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 SLC19A3Q9BZV2 496 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 PAK1IP1Q9NWT1 392 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-214ENST00000560402 CHCHD3Q9NX63 227 aaKnown RBP11.71□□□□□ -0.53
SMAD3-214ENST00000560402 MRPL39Q9NYK5 338 aaKnown RBP11.71□□□□□ -0.53
SMAD3-214ENST00000560402 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMAD3-214ENST00000560402 CMAHPQ9Y471 501 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 SPEF1Q9Y4P9 236 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 ZNF503-AS2A6NEH8 195 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 VGLL3A8MV65 326 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 BGLAPP02818 100 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 HTR1AP08908 422 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 SAGP10523 405 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-214ENST00000560402 GRK5P34947 590 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 PUDPQ08623 228 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 ST3GAL4Q11206 333 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 TMPRSS11FQ6ZWK6 438 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 ZNF367Q7RTV3 350 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 TMEM163Q8TC26 289 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 UBASH3BQ8TF42 649 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 GGHQ92820 318 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 MRPL24Q96A35 216 aaKnown RBP11.7□□□□□ -0.54
SMAD3-214ENST00000560402 BPIFA2Q96DR5 249 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 ZNF837Q96EG3 531 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-214ENST00000560402 IL4I1Q96RQ9 567 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 C19orf24Q9BVV8 132 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 ULBP2Q9BZM5 246 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 ACOT13Q9NPJ3 140 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 FKBP14Q9NWM8 211 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 B3GNT2Q9NY97 397 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 IL20Q9NYY1 176 aa11.7□□□□□ -0.54
SMAD3-214ENST00000560402 H2AFY2Q9P0M6 372 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-214ENST00000560402 TMEM129A0AVI4 362 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 M0R233 179 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 SYNGR3O43761 229 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 UBL3O95164 117 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 RAB36O95755 333 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 MT-ATP6P00846 226 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 IFNGP01579 166 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 ZNF14P17017 642 aaPredicted RBP11.69□□□□□ -0.54
SMAD3-214ENST00000560402 MYL12AP19105 171 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 FUT4P22083 530 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 NR4A1P22736 598 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 APEX1P27695 318 aaKnown RBP11.69□□□□□ -0.54
SMAD3-214ENST00000560402 SLC6A6P31641 620 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 SLC9A3P48764 834 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 DYNC1I2Q13409 638 aaKnown RBP11.69□□□□□ -0.54
SMAD3-214ENST00000560402 RIN1Q13671 783 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 CR1LQ2VPA4 569 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 SYT6Q5T7P8 510 aaPredicted RBP11.69□□□□□ -0.54
SMAD3-214ENST00000560402 UBE2UQ5VVX9 321 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 LIPNQ5VXI9 398 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 ZNF813Q6ZN06 617 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 IL17RELQ6ZVW7 336 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 PXKQ7Z7A4 578 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 GID4Q8IVV7 300 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 RFLNBQ8N5W9 214 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 LINC01356Q8N9X3 169 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 OR9Q1Q8NGQ5 310 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 UBE2FQ969M7 185 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 C12orf43Q96C57 262 aaKnown RBP11.69□□□□□ -0.54
SMAD3-214ENST00000560402 C1orf159Q96HA4 380 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 TMEM80Q96HE8 168 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 FOXB1Q99853 325 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 PRSS27Q9BQR3 290 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 EGLN3Q9H6Z9 239 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 DNAJC27Q9NZQ0 273 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 AASSQ9UDR5 926 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 ERGIC3Q9Y282 383 aa11.69□□□□□ -0.54
SMAD3-214ENST00000560402 ZNF726A6NNF4 738 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 MS4A18H0YCH9 400 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 SLC22A1O15245 554 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 PRODHO43272 600 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 PIP5K1CO60331 668 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 LILRA1O75019 489 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 ENTPD6O75354 484 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 HLA-HP01893 362 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 CD79AP11912 226 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 IFNGR1P15260 489 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 PAICSP22234 425 aaKnown RBP11.68□□□□□ -0.54
SMAD3-214ENST00000560402 GLRXP35754 106 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 PIGFQ07326 219 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 MS4A18Q3C1V0 323 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 TIMM50Q3ZCQ8 353 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 ARMC4Q5T2S8 1044 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 CARD17Q5XLA6 110 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 SMARCD3Q6STE5 483 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 ANKRD13BQ86YJ7 626 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 IQCF1Q8N6M8 205 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 OR6N1Q8NGY5 312 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 OR5J2Q8NH18 312 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 ZFAND2BQ8WV99 257 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 SGTBQ96EQ0 304 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms