RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 B9A039 149 aa16.06■□□□□ 0.16
CASC4-209ENST00000559222 IFNGP01579 166 aa16.06■□□□□ 0.16
CASC4-209ENST00000559222 LCKP06239 509 aa16.06■□□□□ 0.16
CASC4-209ENST00000559222 ZNF3P17036 446 aa16.06■□□□□ 0.16
CASC4-209ENST00000559222 ANOS1P23352 680 aa16.06■□□□□ 0.16
CASC4-209ENST00000559222 POLR2IP36954 125 aaKnown RBP16.06■□□□□ 0.16
CASC4-209ENST00000559222 MPV17P39210 176 aa16.06■□□□□ 0.16
CASC4-209ENST00000559222 SNRPD2P62316 118 aaKnown RBP16.06■□□□□ 0.16
CASC4-209ENST00000559222 ALKBH6Q3KRA9 238 aa16.06■□□□□ 0.16
CASC4-209ENST00000559222 SHEQ5VZ18 495 aa16.06■□□□□ 0.16
CASC4-209ENST00000559222 PLBD1Q6P4A8 553 aa16.06■□□□□ 0.16
CASC4-209ENST00000559222 ZDHHC13Q8IUH4 622 aa16.06■□□□□ 0.16
CASC4-209ENST00000559222 PARP8Q8N3A8 854 aa16.06■□□□□ 0.16
CASC4-209ENST00000559222 OR10H5Q8NGA6 315 aa16.06■□□□□ 0.16
CASC4-209ENST00000559222 OR1J1Q8NGS3 322 aa16.06■□□□□ 0.16
CASC4-209ENST00000559222 OR6K6Q8NGW6 343 aa16.06■□□□□ 0.16
CASC4-209ENST00000559222 TRMT61AQ96FX7 289 aaKnown RBP16.06■□□□□ 0.16
CASC4-209ENST00000559222 MAP6Q96JE9 813 aa16.06■□□□□ 0.16
CASC4-209ENST00000559222 RAB3IPQ96QF0 476 aaPredicted RBP16.06■□□□□ 0.16
CASC4-209ENST00000559222 CYB5R1Q9UHQ9 305 aa16.06■□□□□ 0.16
CASC4-209ENST00000559222 MAP1AP78559 2803 aaPredicted RBP16.06■□□□□ 0.16
CASC4-209ENST00000559222 SSX4O60224 188 aa16.05■□□□□ 0.16
CASC4-209ENST00000559222 PCSK6P29122 969 aa16.05■□□□□ 0.16
CASC4-209ENST00000559222 ALDH3B1P43353 468 aa16.05■□□□□ 0.16
CASC4-209ENST00000559222 PPP2R2BQ00005 443 aa16.05■□□□□ 0.16
CASC4-209ENST00000559222 PTGES3Q15185 160 aaKnown RBP16.05■□□□□ 0.16
CASC4-209ENST00000559222 RAB35Q15286 201 aa16.05■□□□□ 0.16
CASC4-209ENST00000559222 RSPO1Q2MKA7 263 aaPredicted RBP16.05■□□□□ 0.16
CASC4-209ENST00000559222 RGS7BPQ6MZT1 257 aaPredicted RBP16.05■□□□□ 0.16
CASC4-209ENST00000559222 ALDH16A1Q8IZ83 802 aa16.05■□□□□ 0.16
CASC4-209ENST00000559222 OR1F12Q8NHA8 337 aa16.05■□□□□ 0.16
CASC4-209ENST00000559222 ABHD4Q8TB40 342 aa16.05■□□□□ 0.16
CASC4-209ENST00000559222 VRK1Q99986 396 aaPredicted RBP16.05■□□□□ 0.16
CASC4-209ENST00000559222 TMUB1Q9BVT8 246 aa16.05■□□□□ 0.16
CASC4-209ENST00000559222 TPK1Q9H3S4 243 aa16.05■□□□□ 0.16
CASC4-209ENST00000559222 S100A14Q9HCY8 104 aa16.05■□□□□ 0.16
CASC4-209ENST00000559222 DLL4Q9NR61 685 aa16.05■□□□□ 0.16
CASC4-209ENST00000559222 SPEF1Q9Y4P9 236 aa16.05■□□□□ 0.16
CASC4-209ENST00000559222 CR1P17927 2039 aa16.05■□□□□ 0.16
CASC4-209ENST00000559222 COX5BP10606 129 aa16.04■□□□□ 0.16
CASC4-209ENST00000559222 IGFBP5P24593 272 aa16.04■□□□□ 0.16
CASC4-209ENST00000559222 ELFN2Q5R3F8 820 aa16.04■□□□□ 0.16
CASC4-209ENST00000559222 ZFP1Q6P2D0 407 aa16.04■□□□□ 0.16
CASC4-209ENST00000559222 BCDIN3DQ7Z5W3 292 aaKnown RBP16.04■□□□□ 0.16
CASC4-209ENST00000559222 CPOQ8IVL8 374 aa16.04■□□□□ 0.16
CASC4-209ENST00000559222 SLC25A40Q8TBP6 338 aa16.04■□□□□ 0.16
CASC4-209ENST00000559222 DNAJC9Q8WXX5 260 aa16.04■□□□□ 0.16
CASC4-209ENST00000559222 C4orf45Q96LM5 186 aa16.04■□□□□ 0.16
CASC4-209ENST00000559222 WACQ9BTA9 647 aa16.04■□□□□ 0.16
CASC4-209ENST00000559222 OR51V1Q9H2C8 321 aa16.04■□□□□ 0.16
CASC4-209ENST00000559222 TVP23BQ9NYZ1 205 aa16.04■□□□□ 0.16
CASC4-209ENST00000559222 DUSP13Q9UII6 198 aa16.04■□□□□ 0.16
CASC4-209ENST00000559222 NDRG4Q9ULP0 352 aaKnown RBP16.04■□□□□ 0.16
CASC4-209ENST00000559222 FLNAP21333 2647 aaKnown RBP16.03■□□□□ 0.16
CASC4-209ENST00000559222 ZAR1LA6NP61 321 aa16.03■□□□□ 0.16
CASC4-209ENST00000559222 PRKYO43930 277 aa16.03■□□□□ 0.16
CASC4-209ENST00000559222 ADRA2AP08913 450 aa16.03■□□□□ 0.16
CASC4-209ENST00000559222 SPARCP09486 303 aa16.03■□□□□ 0.16
CASC4-209ENST00000559222 PPOXP50336 477 aa16.03■□□□□ 0.16
CASC4-209ENST00000559222 PPP1CBP62140 327 aa16.03■□□□□ 0.16
CASC4-209ENST00000559222 RPS23P62266 143 aaKnown RBP16.03■□□□□ 0.16
CASC4-209ENST00000559222 CLEC12BQ2HXU8 276 aa16.03■□□□□ 0.16
CASC4-209ENST00000559222 PRSS57Q6UWY2 283 aa16.03■□□□□ 0.16
CASC4-209ENST00000559222 DNM1P46Q6ZS02 220 aa16.03■□□□□ 0.16
CASC4-209ENST00000559222 ZNF525Q8N782 197 aa16.03■□□□□ 0.16
CASC4-209ENST00000559222 GJC3Q8NFK1 279 aa16.03■□□□□ 0.16
CASC4-209ENST00000559222 IPCEF1Q8WWN9 437 aaPredicted RBP16.03■□□□□ 0.16
CASC4-209ENST00000559222 ZMYND19Q96E35 227 aaPredicted RBP16.03■□□□□ 0.16
CASC4-209ENST00000559222 MARS2Q96GW9 593 aaKnown RBP16.03■□□□□ 0.16
CASC4-209ENST00000559222 OSBPL10Q9BXB5 764 aa16.03■□□□□ 0.16
CASC4-209ENST00000559222 OR2J1Q9GZK6 312 aa16.03■□□□□ 0.16
CASC4-209ENST00000559222 GRIP1Q9Y3R0 1128 aa16.03■□□□□ 0.16
CASC4-209ENST00000559222 PMF1-BGLAPU3KQ54 211 aa16.03■□□□□ 0.16
CASC4-209ENST00000559222 IGLV3-9A0A075B6K5 115 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 PRR23D1E9PI22 279 aaPredicted RBP16.02■□□□□ 0.16
CASC4-209ENST00000559222 H7C1Q1 480 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 EI24O14681 340 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 SELENOFO60613 162 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 ICMTO60725 284 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 ABHD16AO95870 558 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 PRR23D2P0DMB1 279 aaPredicted RBP16.02■□□□□ 0.16
CASC4-209ENST00000559222 ZNF250P15622 560 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 ZNF823P16415 610 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 SLC2A5P22732 501 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 FMO3P31513 532 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 RAD52P43351 418 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 ENTPD1P49961 510 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 NUDT6P53370 316 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 TNK1Q13470 666 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 KRTAP27-1Q3LI81 207 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 SLX4IPQ5VYV7 408 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 C12orf73Q69YU5 71 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 CXXC5Q7LFL8 322 aaKnown RBP16.02■□□□□ 0.16
CASC4-209ENST00000559222 NAA40Q86UY6 237 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 SYNPRQ8TBG9 265 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 AMELYQ99218 206 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 PITX2Q99697 317 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 COQ7Q99807 217 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 BCL2L14Q9BZR8 327 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 HDHD2Q9H0R4 259 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms