RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 MEPCEQ7L2J0 689 aaKnown RBP9.4□□□□□ -0.9
TPM1-217ENST00000559108 SSX6Q7RTT6 188 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 DCXRQ7Z4W1 244 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 SYT9Q86SS6 491 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 OR8J1Q8NGP2 316 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 OR6N2Q8NGY6 317 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 OR1F12Q8NHA8 337 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 RHOXF1Q8NHV9 184 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 LURAP1Q96LR2 239 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 RDH12Q96NR8 316 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 INTS14Q96SY0 518 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 ABHD6Q9BV23 337 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 UBTD1Q9HAC8 227 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 SLC24A3Q9HC58 644 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 PCDHGB5Q9Y5G0 923 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 ORC6Q9Y5N6 252 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 ANKRD17O75179 2603 aaKnown RBP9.39□□□□□ -0.91
TPM1-217ENST00000559108 C5orf49A4QMS7 147 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 HS3ST1O14792 307 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 SMPD2O60906 423 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 CD8AP01732 235 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 PAICSP22234 425 aaKnown RBP9.39□□□□□ -0.91
TPM1-217ENST00000559108 HTR1FP30939 366 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 THBS4P35443 961 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 HTR5AP47898 357 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 PRSS12P56730 875 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 ISL1P61371 349 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 RPS7P62081 194 aaKnown RBP9.39□□□□□ -0.91
TPM1-217ENST00000559108 SCRN3Q0VDG4 424 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 MAD2L1BPQ15013 274 aaPredicted RBP9.39□□□□□ -0.91
TPM1-217ENST00000559108 RAB35Q15286 201 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 MST1LQ2TV78 715 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 SLC35D3Q5M8T2 416 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 ELFN2Q5R3F8 820 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 SLC25A30Q5SVS4 291 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 C1QTNF12Q5T7M4 302 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 SSX8Q7RTT4 187 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 DPPA2Q7Z7J5 298 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 LRP11Q86VZ4 500 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 OR10H5Q8NGA6 315 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 OR4F15Q8NGB8 312 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 CNIH3Q8TBE1 160 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 TMEM171Q8WVE6 324 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 CYGBQ8WWM9 190 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 TFAP2CQ92754 450 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 RADILQ96JH8 1075 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 AMBNQ9NP70 447 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 NGBQ9NPG2 151 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 DDX28Q9NUL7 540 aaKnown RBP9.39□□□□□ -0.91
TPM1-217ENST00000559108 PLEK2Q9NYT0 353 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 MYEF2Q9P2K5 600 aaKnown RBP9.39□□□□□ -0.91
TPM1-217ENST00000559108 FBXL3Q9UKT7 428 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 POLR1DQ9Y2S0 133 aa9.39□□□□□ -0.91
TPM1-217ENST00000559108 TMEM129A0AVI4 362 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 J3QRE1 110 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 PSMD9O00233 223 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 GOSR1O95249 250 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 CRYAAP02489 173 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 ZNF823P16415 610 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 ALOX5APP20292 161 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 NR4A1P22736 598 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 OTX1P32242 354 aaPredicted RBP9.38□□□□□ -0.91
TPM1-217ENST00000559108 CAPGP40121 348 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 CDC42P60953 191 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 PCBD1P61457 104 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 ZNF91Q05481 1191 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 SNTB2Q13425 540 aaKnown RBP9.38□□□□□ -0.91
TPM1-217ENST00000559108 EIF2B1Q14232 305 aaKnown RBP9.38□□□□□ -0.91
TPM1-217ENST00000559108 ADIPOQQ15848 244 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 OCLNQ16625 522 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 C11orf71Q6IPW1 123 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 VHLLQ6RSH7 139 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 IZUMO2Q6UXV1 221 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 SLC16A9Q7RTY1 509 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 OTOSQ8NHW6 89 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 FBLIM1Q8WUP2 373 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 GTF3AQ92664 365 aaKnown RBP9.38□□□□□ -0.91
TPM1-217ENST00000559108 SLAMF6Q96DU3 332 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 COQ7Q99807 217 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 C8orf4Q9NR00 106 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 CA10Q9NS85 328 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 IMPAD1Q9NX62 359 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 CISD1Q9NZ45 108 aaKnown RBP9.38□□□□□ -0.91
TPM1-217ENST00000559108 FZR1Q9UM11 496 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 PLEKHA6Q9Y2H5 1048 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 ATP23Q9Y6H3 246 aa9.38□□□□□ -0.91
TPM1-217ENST00000559108 IQCMA0A1B0GVH7 501 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 ICMTO60725 284 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 ATE1O95260 518 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 SBK2P0C263 348 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 ACSM4P0C7M7 580 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 COX5BP10606 129 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 CD53P19397 219 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 CCNOP22674 350 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 MPV17P39210 176 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 OPRL1P41146 370 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 GUCA1AP43080 201 aaPredicted RBP9.37□□□□□ -0.91
TPM1-217ENST00000559108 GDI2P50395 445 aaKnown RBP9.37□□□□□ -0.91
TPM1-217ENST00000559108 DOC2BQ14184 412 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 SNAI3Q3KNW1 292 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms