RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 HACD4Q5VWC8 232 aa14.04□□□□□ -0.16
CDC42BPB-204ENST00000559043 C5orf46Q6UWT4 87 aa14.04□□□□□ -0.16
CDC42BPB-204ENST00000559043 SYT9Q86SS6 491 aa14.04□□□□□ -0.16
CDC42BPB-204ENST00000559043 KDM8Q8N371 416 aa14.04□□□□□ -0.16
CDC42BPB-204ENST00000559043 ROBO4Q8WZ75 1007 aa14.04□□□□□ -0.16
CDC42BPB-204ENST00000559043 RGP1Q92546 391 aaPredicted RBP14.04□□□□□ -0.16
CDC42BPB-204ENST00000559043 ZNF486Q96H40 463 aaPredicted RBP14.04□□□□□ -0.16
CDC42BPB-204ENST00000559043 MAP6Q96JE9 813 aa14.04□□□□□ -0.16
CDC42BPB-204ENST00000559043 ADAD1Q96M93 576 aaKnown RBP14.04□□□□□ -0.16
CDC42BPB-204ENST00000559043 CMTM3Q96MX0 182 aa14.04□□□□□ -0.16
CDC42BPB-204ENST00000559043 ALKBH4Q9NXW9 302 aa14.04□□□□□ -0.16
CDC42BPB-204ENST00000559043 MRM2Q9UI43 246 aaKnown RBP14.04□□□□□ -0.16
CDC42BPB-204ENST00000559043 SPATA2Q9UM82 520 aa14.04□□□□□ -0.16
CDC42BPB-204ENST00000559043 N6AMT1Q9Y5N5 214 aa14.04□□□□□ -0.16
CDC42BPB-204ENST00000559043 GJE1A6NN92 205 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 H7C1C5 153 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 PSMD9O00233 223 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 LANCL1O43813 399 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 OR2T1O43869 369 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 TMEM127O75204 238 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 EDN3P14138 238 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 SRMP19623 302 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 NR4A2P43354 598 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 NKX2-5P52952 324 aaPredicted RBP14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 RAC3P60763 192 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 LCN6P62502 163 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 TBRG1Q3YBR2 411 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 ZNF57Q68EA5 555 aaPredicted RBP14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 ADGRE4PQ86SQ3 457 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 GLCCI1Q86VQ1 547 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 ZNF417Q8TAU3 575 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 SNX18Q96RF0 628 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 ZNF587Q96SQ5 575 aaPredicted RBP14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 HDHD2Q9H0R4 259 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 NOX4Q9NPH5 578 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 ZNF835Q9Y2P0 537 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 MS4A18H0YCH9 400 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 SMAD9O15198 467 aaKnown RBP14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 TGM6O95932 706 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 SNRPBP14678 240 aaKnown RBP14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 AHCYP23526 432 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 AGFG1P52594 562 aaKnown RBP14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 EGR3Q06889 387 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 TATDN3Q17R31 274 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 MS4A18Q3C1V0 323 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 LIPNQ5VXI9 398 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 C3P1Q6ZMU1 363 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 FAM220AQ7Z4H9 259 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 ZNF843Q8N446 348 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 MEIOBQ8N635 442 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 OR6S1Q8NH40 331 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 UPRTQ96BW1 309 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 DERL3Q96Q80 235 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 WDR76Q9H967 626 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 NLKQ9UBE8 527 aa14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 AK6Q9Y3D8 172 aaKnown RBP14.03□□□□□ -0.16
CDC42BPB-204ENST00000559043 POLEQ07864 2286 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 A6NIN4 97 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 SLC43A1O75387 559 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 AQP8O94778 261 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 UBL3O95164 117 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 OR8G3PP0DMU2 310 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 ALOX5APP20292 161 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 SLC6A1P30531 599 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 ALKBH1Q13686 389 aaKnown RBP14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 GPR176Q14439 515 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 RTL6Q6ICC9 239 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 ZNF585AQ6P3V2 769 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 DOLPP1Q86YN1 238 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 RPRMLQ8N4K4 120 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 ZNF519Q8TB69 540 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 FNDC9Q8TBE3 224 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 FAM57AQ8TBR7 257 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 HSD17B8Q92506 261 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 ITFG2Q969R8 447 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 GFI1Q99684 422 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 SYT4Q9H2B2 425 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 BRD7Q9NPI1 651 aa14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 NUFIP1Q9UHK0 495 aaKnown RBP14.02□□□□□ -0.16
CDC42BPB-204ENST00000559043 TVP23AA6NH52 213 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 HSPB2A8KAH6 182 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 PLPP3O14495 311 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 PDCD5O14737 125 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 ARHGEF9O43307 516 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 IGHMP01871 453 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 TPOP07202 933 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 MMP15P51511 669 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 RPL27P61353 136 aaKnown RBP14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 SLC35A1P78382 337 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 HSPB2Q16082 182 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 ZNF239Q16600 458 aaKnown RBP14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 BAIAP2L2Q6UXY1 529 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 NHLRC1Q6VVB1 395 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 CD163Q86VB7 1156 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 PM20D2Q8IYS1 436 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 DTX3Q8N9I9 347 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 MRPL39Q9NYK5 338 aaKnown RBP14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 FRRS1LQ9P0K9 344 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 LAMP5Q9UJQ1 280 aa14.02□□□□□ -0.17
CDC42BPB-204ENST00000559043 ITGB1BP2Q9UKP3 347 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms