RNA–Protein interactions for RNA: ENST00000557958.1

LDLR-206, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 1,881 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-206ENST00000557958 KCNJ8Q15842 424 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 C10orf128Q5T292 105 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 PYHIN1Q6K0P9 492 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 LRFN4Q6PJG9 635 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 GGNQ86UU5 652 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 IL17RDQ8NFM7 739 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 FDCSPQ8NFU4 85 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 OR4M1Q8NGD0 313 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 TMEM54Q969K7 222 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 CPNE4Q96A23 557 aaPredicted RBP14.93□□□□□ -0.02
LDLR-206ENST00000557958 FAM122AQ96E09 287 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 KCNJ15Q99712 375 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 MOB1AQ9H8S9 216 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 GDF2Q9UK05 429 aaPredicted RBP14.93□□□□□ -0.02
LDLR-206ENST00000557958 SLC22A13Q9Y226 551 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 RCE1Q9Y256 329 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 SRSF10O75494 262 aaKnown RBP14.93□□□□□ -0.02
LDLR-206ENST00000557958 KLK2P20151 261 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 HSD11B1P28845 292 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 ZNF133P52736 654 aaPredicted RBP14.93□□□□□ -0.02
LDLR-206ENST00000557958 CLDN20P56880 219 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 LSM6P62312 80 aaKnown RBP14.93□□□□□ -0.02
LDLR-206ENST00000557958 P2RY14Q15391 338 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 TAF13Q15543 124 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 MZT2BQ6NZ67 158 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 CORO6Q6QEF8 472 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 CCBE1Q6UXH8 406 aaPredicted RBP14.93□□□□□ -0.02
LDLR-206ENST00000557958 GDPD3Q7L5L3 318 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 RDH10Q8IZV5 341 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 SNIP1Q8TAD8 396 aaKnown RBP14.93□□□□□ -0.02
LDLR-206ENST00000557958 SRXN1Q9BYN0 137 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 ZNF552Q9H707 407 aaPredicted RBP14.93□□□□□ -0.02
LDLR-206ENST00000557958 ZNF703Q9H7S9 590 aaPredicted RBP14.93□□□□□ -0.02
LDLR-206ENST00000557958 TMEM165Q9HC07 324 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 MOV10Q9HCE1 1003 aaKnown RBP14.93□□□□□ -0.02
LDLR-206ENST00000557958 NPAP1Q9NZP6 1156 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 ETV7Q9Y603 341 aa14.93□□□□□ -0.02
LDLR-206ENST00000557958 ALPK2Q86TB3 2170 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 DOCK10Q96BY6 2186 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 KLRC4-KLRK1H3BQV0 150 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 SMAD9O15198 467 aaKnown RBP14.92□□□□□ -0.02
LDLR-206ENST00000557958 WNT11O96014 354 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 HPNP05981 417 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 MSR1P21757 451 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 RFC3P40938 356 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 EIF2S3P41091 472 aaKnown RBP14.92□□□□□ -0.02
LDLR-206ENST00000557958 EIF1AXP47813 144 aaKnown RBP14.92□□□□□ -0.02
LDLR-206ENST00000557958 ZNF84P51523 738 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 GFRA1P56159 465 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 TAB1Q15750 504 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 HACD4Q5VWC8 232 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 UBQLNLQ8IYU4 475 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 TMEM123Q8N131 208 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 OR51A4Q8NGJ6 313 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 LGALS14Q8TCE9 139 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 ZNF385AQ96PM9 386 aaKnown RBP14.92□□□□□ -0.02
LDLR-206ENST00000557958 FBXL3Q9UKT7 428 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 LHFPL6Q9Y693 200 aa14.92□□□□□ -0.02
LDLR-206ENST00000557958 A0A087WV48 116 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 A0A0G2JMP0 313 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 A0A0X1KG70 313 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 PINLYPA6NC86 204 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 TTLL8A6PVC2 850 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 SLC43A1O75387 559 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 UBL3O95164 117 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 MAGEB1P43366 347 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 SUCLG1P53597 346 aaKnown RBP14.91□□□□□ -0.02
LDLR-206ENST00000557958 CCDC92Q53HC0 331 aaPredicted RBP14.91□□□□□ -0.02
LDLR-206ENST00000557958 HES5Q5TA89 166 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 LRRTM1Q86UE6 522 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 SULF2Q8IWU5 870 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 OR4M2Q8NGB6 313 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 OR10AC1Q8NH08 325 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 OR10D3Q8NH80 312 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 ORAI1Q96D31 301 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 ADGRG7Q96K78 797 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 WACQ9BTA9 647 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 ULBP2Q9BZM5 246 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 NELFAQ9H3P2 528 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 LIN7BQ9HAP6 207 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 EMC7Q9NPA0 242 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 G6PC2Q9NQR9 355 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 FOXJ3Q9UPW0 622 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 AKAP13Q12802 2813 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 MED13Q9UHV7 2174 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 FREM3P0C091 2139 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 OR5H15A6NDH6 313 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 CXCL13O43927 109 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 MAS1P04201 325 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 GSTT2P0CG29 244 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 GSTT2BP0CG30 244 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 CD46P15529 392 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 SPNP16150 400 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 FSTP19883 344 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 CDAP32320 146 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 GRB2P62993 217 aaKnown RBP14.91□□□□□ -0.02
LDLR-206ENST00000557958 PLGLB1Q02325 96 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 OR13C3Q8NGS6 347 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 OR5H6Q8NGV6 325 aa14.91□□□□□ -0.02
LDLR-206ENST00000557958 RAB40AQ8WXH6 277 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms