RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ZNF75AQ96N20 296 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 SMIM14Q96QK8 99 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 TSG101Q99816 390 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 OPRPNQ99935 248 aaPredicted RBP2.94□□□□□ -1.94
TDP1-217ENST00000557782 UQCC2Q9BRT2 126 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 DCUN1D5Q9BTE7 237 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 LRRC61Q9BV99 259 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 BARHL1Q9BZE3 327 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 TRIM15Q9C019 465 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 POLR2J2Q9GZM3 115 aaKnown RBP2.94□□□□□ -1.94
TDP1-217ENST00000557782 POLR2J3Q9H1A7 115 aaKnown RBP2.94□□□□□ -1.94
TDP1-217ENST00000557782 PORCNQ9H237 461 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 RPF2Q9H7B2 306 aaKnown RBP2.94□□□□□ -1.94
TDP1-217ENST00000557782 ZNF696Q9H7X3 374 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 TMEM9BQ9NQ34 198 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 SIRT7Q9NRC8 400 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 ABCB10Q9NRK6 738 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 SDHAF3Q9NRP4 125 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 MAT2BQ9NZL9 334 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 XCL2Q9UBD3 114 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 Q9UF83 564 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 CES1P1Q9UKY3 287 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 SCML1Q9UN30 329 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 KCNE3Q9Y6H6 103 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 IGKV2D-30A0A075B6S6 120 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 IGHV3OR16-10A0A075B7F0 116 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 A0A1B0GU03 582 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 NCBP2LA6PVI3 153 aaKnown RBP2.93□□□□□ -1.94
TDP1-217ENST00000557782 ANKRD65E5RJM6 399 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 PRAMEF26H0Y7S4 382 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 GABRPO00591 440 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 PLPP3O14495 311 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 ENSAO43768 121 aaKnown RBP2.93□□□□□ -1.94
TDP1-217ENST00000557782 SRP72O76094 671 aaKnown RBP2.93□□□□□ -1.94
TDP1-217ENST00000557782 TNFAIP8O95379 198 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 BRI3O95415 125 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 OXTP01178 125 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 SEMG1P04279 462 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 KRT7P08729 469 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 CCDC166P0CW27 439 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 RD3LP0DJH9 198 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 SMIM10L1P0DMW3 83 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 IGFBP3P17936 291 aaPredicted RBP2.93□□□□□ -1.94
TDP1-217ENST00000557782 GGT1P19440 569 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 SHC1P29353 583 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 RGS19P49795 217 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 FABP6P51161 128 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 SLC25A1P53007 311 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 HCCSP53701 268 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 ZNF121P58317 390 aaPredicted RBP2.93□□□□□ -1.94
TDP1-217ENST00000557782 OR2B8PP59922 312 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 IFFO1Q0D2I5 559 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 ZNF763Q0D2J5 394 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 ITGB3BPQ13352 177 aaPredicted RBP2.93□□□□□ -1.94
TDP1-217ENST00000557782 SLC1A5Q15758 541 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 ACTL10Q5JWF8 245 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 NPSR1Q6W5P4 371 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 AHSA2Q719I0 299 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 MOB1BQ7L9L4 216 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 MRPL55Q7Z7F7 128 aaKnown RBP2.93□□□□□ -1.94
TDP1-217ENST00000557782 OAFQ86UD1 273 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 PNKDQ8N490 385 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 OR52E2Q8NGJ4 325 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 OR1N2Q8NGR9 330 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 DOK4Q8TEW6 326 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 SMIM10Q96HG1 83 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 COL21A1Q96P44 957 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 EBF4Q9BQW3 602 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 C19orf24Q9BVV8 132 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 BEX2Q9BXY8 128 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 CHRNA10Q9GZZ6 450 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 Q9H3A6 140 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 SRMSQ9H3Y6 488 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 PTGES2Q9H7Z7 377 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 REEP1Q9H902 201 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 TMBIM4Q9HC24 238 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 SCRT2Q9NQ03 307 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 AIG1Q9NVV5 245 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 RHBDL2Q9NX52 303 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 CFL2Q9Y281 166 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 SLC25A15Q9Y619 301 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 RAI1Q7Z5J4 1906 aaPredicted RBP2.93□□□□□ -1.94
TDP1-217ENST00000557782 UNC13AQ9UPW8 1703 aa2.93□□□□□ -1.94
TDP1-217ENST00000557782 MTCL1Q9Y4B5 1905 aaKnown RBP2.92□□□□□ -1.94
TDP1-217ENST00000557782 IGLV8-61A0A075B6I0 122 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 IGKV1D-13A0A0B4J2D9 117 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 GOLGA8IPA6NC78 632 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 GOLGA8JA6NMD2 632 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 SHISA9B4DS77 424 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 H0YHG0 523 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 CLDN34H7C241 214 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 SULT1C2O00338 296 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 SGCEO43556 437 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 CDC40O60508 579 aaKnown RBP eCLIP2.92□□□□□ -1.94
TDP1-217ENST00000557782 SLC16A7O60669 478 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 GALR3O60755 368 aaPredicted RBP2.92□□□□□ -1.94
TDP1-217ENST00000557782 ZNF780AO75290 641 aaPredicted RBP2.92□□□□□ -1.94
TDP1-217ENST00000557782 CRLF1O75462 422 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 VENTXO95231 258 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 GP1BAP07359 652 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms