RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 SPRNQ5BIV9 151 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 USP43Q70EL4 1123 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 BPIFB2Q8N4F0 458 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 SPICQ8N5J4 248 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 NANPQ8TBE9 248 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 CMBLQ96DG6 245 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 CMTM5Q96DZ9 223 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 DCLRE1CQ96SD1 692 aaKnown RBP12.38□□□□□ -0.43
SHMT2-235ENST00000557740 GPX7Q96SL4 187 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-235ENST00000557740 SUCNR1Q9BXA5 334 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 POFUT1Q9H488 388 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 C7orf69Q9H7B7 122 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 SPAG4Q9NPE6 437 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 MED4Q9NPJ6 270 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 NRIP3Q9NQ35 241 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 TMEM106BQ9NUM4 274 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 VSX1Q9NZR4 365 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-235ENST00000557740 NDUFAF4Q9P032 175 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 ABCD2Q9UBJ2 740 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 EGFL7Q9UHF1 273 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 IL20RAQ9UHF4 553 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 KLHL21Q9UJP4 597 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 SAMD4AQ9UPU9 718 aaKnown RBP12.38□□□□□ -0.43
SHMT2-235ENST00000557740 COA3Q9Y2R0 106 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-235ENST00000557740 NPTNQ9Y639 398 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 UNC119BA6NIH7 251 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 SURF4O15260 269 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 FOXH1O75593 365 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 IGHV2-70P01814 119 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 SBK2P0C263 348 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 KITLGP21583 273 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 CENPAP49450 140 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 RGS6P49758 472 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 RPS6KA3P51812 740 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 LSM6P62312 80 aaKnown RBP12.37□□□□□ -0.43
SHMT2-235ENST00000557740 OTPQ5XKR4 325 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 TSEN54Q7Z6J9 526 aaKnown RBP12.37□□□□□ -0.43
SHMT2-235ENST00000557740 OR1F12Q8NHA8 337 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 FANK1Q8TC84 345 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 SLC7A6Q92536 515 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 SAMD8Q96LT4 415 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 RBM4Q9BWF3 364 aaKnown RBP12.37□□□□□ -0.43
SHMT2-235ENST00000557740 DCAF16Q9NXF7 216 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 ADA2Q9NZK5 511 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 ATPIF1Q9UII2 106 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 STARD10Q9Y365 291 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 IER3IP1Q9Y5U9 82 aa12.37□□□□□ -0.43
SHMT2-235ENST00000557740 WNK2Q9Y3S1 2297 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 TRBV4-1A0A0J9YWV2 114 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 OR6C6A6NF89 314 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 J3QW42 95 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 PTP4A3O75365 173 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 OMPP47874 163 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 GLYATQ6IB77 296 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 PGM2L1Q6PCE3 622 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 DNM1P34Q6PK57 102 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 SMARCD3Q6STE5 483 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 DPY19L2P2Q6ZN68 376 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 Q6ZR03 302 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-235ENST00000557740 JAZF1Q86VZ6 243 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 KLHL36Q8N4N3 616 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 OR52J3Q8NH60 311 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 ITLN1Q8WWA0 313 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 HAVCR1Q96D42 359 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 SLC6A7Q99884 636 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 NUAK2Q9H093 628 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 DCAF13Q9NV06 445 aaKnown RBP12.36□□□□□ -0.43
SHMT2-235ENST00000557740 PPP1R3CQ9UQK1 317 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 V9GYQ6 96 aa12.36□□□□□ -0.43
SHMT2-235ENST00000557740 RER1O15258 196 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 DIRAS1O95057 198 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 RAC2P15153 192 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 CRABP1P29762 137 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 PRDX6P30041 224 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 SMIM11AP58511 58 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 BTG1P62324 171 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 HNRNPA0Q13151 305 aaKnown RBP12.35□□□□□ -0.43
SHMT2-235ENST00000557740 SEC23BQ15437 767 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 TMEM155Q4W5P6 130 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 CCDC92Q53HC0 331 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-235ENST00000557740 PTCHD4Q6ZW05 846 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 OR5AS1Q8N127 324 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 ZNF283Q8N7M2 679 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 FAM86B1Q8N7N1 296 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 OR5L1Q8NGL2 311 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 FAM216AQ8WUB2 273 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 GCDHQ92947 438 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-235ENST00000557740 PTP4A1Q93096 173 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 C7orf34Q96L11 122 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 OR2V2Q96R30 315 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 ELAC2Q9BQ52 826 aaKnown RBP12.35□□□□□ -0.43
SHMT2-235ENST00000557740 HDHD2Q9H0R4 259 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 PTTG3PQ9NZH4 202 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 IL19Q9UHD0 177 aa12.35□□□□□ -0.43
SHMT2-235ENST00000557740 PPIAL4EA0A075B759 164 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 PPIAL4CA0A0B4J2A2 164 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 PPIAL4DF5H284 164 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 IMPA2O14732 288 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 PPP1R3DO95685 299 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms