RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 KCNG2Q9UJ96 466 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 NDRG4Q9ULP0 352 aaKnown RBP15.09■□□□□ 0.01
SHMT2-225ENST00000556798 EDARQ9UNE0 448 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 ARID1AO14497 2285 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 MYO9AB2RTY4 2548 aa15.08■□□□□ 0.01
SHMT2-225ENST00000556798 CCDC182A6NF36 153 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 OR6C6A6NF89 314 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 ZNF593O00488 134 aaPredicted RBP15.08■□□□□ 0
SHMT2-225ENST00000556798 SELENOFO60613 162 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 CD8AP01732 235 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 DBHP09172 617 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 OR4A8P0C604 315 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 APOBEC3AP31941 199 aaPredicted RBP15.08■□□□□ 0
SHMT2-225ENST00000556798 ERVS71-1P61550 626 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 EFNB1P98172 346 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 ADIPOQQ15848 244 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 MSMPQ1L6U9 139 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 TMEM171Q8WVE6 324 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 IGFBPL1Q8WX77 278 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 NINJ1Q92982 152 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 PITX2Q99697 317 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 TRAF4Q9BUZ4 470 aaPredicted RBP15.08■□□□□ 0
SHMT2-225ENST00000556798 ZNF442Q9H7R0 627 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 DCLRE1BQ9H816 532 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 PNRC2Q9NPJ4 139 aaKnown RBP15.08■□□□□ 0
SHMT2-225ENST00000556798 ITGB1BP2Q9UKP3 347 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 FZR1Q9UM11 496 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 SPEF1Q9Y4P9 236 aa15.08■□□□□ 0
SHMT2-225ENST00000556798 H0YHG0 523 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 SMPD2O60906 423 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 COX5BP10606 129 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 NAA10P41227 235 aaPredicted RBP15.07■□□□□ 0
SHMT2-225ENST00000556798 CDC42P60953 191 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 SLC35D3Q5M8T2 416 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 AGAP6Q5VW22 663 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 RFPL4BQ6ZWI9 263 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 DPY19L4Q7Z388 723 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 DCXRQ7Z4W1 244 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 DTX2Q86UW9 622 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 TIGD4Q8IY51 512 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 ZNF101Q8IZC7 436 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 OR10S1Q8NGN2 331 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 PIGTQ969N2 578 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 HRASLS5Q96KN8 279 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 HDHD2Q9H0R4 259 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 MARCH7Q9H992 704 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 CBLN4Q9NTU7 201 aa15.07■□□□□ 0
SHMT2-225ENST00000556798 CHD3Q12873 2000 aaKnown RBP15.06■□□□□ 0
SHMT2-225ENST00000556798 E9PQ18 207 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 DLGAP1O14490 977 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 ABHD16AO95870 558 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 LCKP06239 509 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 MRPL3P09001 348 aaKnown RBP15.06■□□□□ 0
SHMT2-225ENST00000556798 GLRXP35754 106 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 SERPINF1P36955 418 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 CDKN1AP38936 164 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 UCP2P55851 309 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 EIF2B1Q14232 305 aaKnown RBP15.06■□□□□ 0
SHMT2-225ENST00000556798 PCK2Q16822 640 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 DEFB113Q30KQ7 82 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 OGFRL1Q5TC84 451 aaPredicted RBP15.06■□□□□ 0
SHMT2-225ENST00000556798 AADACL4Q5VUY2 407 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 NXNL2Q5VZ03 156 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 C11orf71Q6IPW1 123 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 SPATC1Q76KD6 591 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 ABHD4Q8TB40 342 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 UBE2FQ969M7 185 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 COQ7Q99807 217 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 IMPAD1Q9NX62 359 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 SMPD3Q9NY59 655 aaPredicted RBP15.06■□□□□ 0
SHMT2-225ENST00000556798 DNAJC27Q9NZQ0 273 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 EIF3KQ9UBQ5 218 aaKnown RBP15.06■□□□□ 0
SHMT2-225ENST00000556798 GRIP1Q9Y3R0 1128 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 GMPPBQ9Y5P6 360 aa15.06■□□□□ 0
SHMT2-225ENST00000556798 PRRC2AP48634 2157 aaKnown RBP15.05■□□□□ 0
SHMT2-225ENST00000556798 CASQ2O14958 399 aaPredicted RBP15.05■□□□□ -0
SHMT2-225ENST00000556798 TMCC2O75069 709 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 NGFP01138 241 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 PCSK6P29122 969 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 RPS23P62266 143 aaKnown RBP15.05■□□□□ -0
SHMT2-225ENST00000556798 MST1LQ2TV78 715 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 TEX30Q5JUR7 227 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 SPATA46Q5T0L3 261 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 LCN1P1Q5VSP4 162 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 RGS7BPQ6MZT1 257 aaPredicted RBP15.05■□□□□ -0
SHMT2-225ENST00000556798 MEPCEQ7L2J0 689 aaKnown RBP15.05■□□□□ -0
SHMT2-225ENST00000556798 OR8J1Q8NGP2 316 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 OR1J1Q8NGS3 322 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 ST7LQ8TDW4 575 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 MBD6Q96DN6 1003 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 SLAMF6Q96DU3 332 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 C4orf45Q96LM5 186 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 AMELYQ99218 206 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 TEAD3Q99594 435 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 ATF6BQ99941 703 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 SYT3Q9BQG1 590 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 CACNG6Q9BXT2 260 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 MRPL37Q9BZE1 423 aaKnown RBP15.05■□□□□ -0
SHMT2-225ENST00000556798 BCL2L14Q9BZR8 327 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 CXorf56Q9H5V9 222 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms