RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 J3QRK9 145 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 TNFRSF11BO00300 401 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 CCRL2O00421 344 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 PLPP1O14494 284 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 RGS13O14921 159 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 TPD52L2O43399 206 aaKnown RBP3.54□□□□□ -1.84
ATXN3-242ENST00000556644 CYTIPO60759 359 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 FBXO24O75426 580 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 WBP4O75554 376 aaKnown RBP3.54□□□□□ -1.84
ATXN3-242ENST00000556644 UGT2B17O75795 530 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 ZFPL1O95159 310 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 ZNF682O95780 498 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 LGI1O95970 557 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 MT-ND1P03886 318 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 PPIAL4FP0DN26 164 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 GABRB1P18505 474 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 RHCEP18577 417 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 EPORP19235 508 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 RRM2P31350 389 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 TGFBR2P37173 567 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 GATA4P43694 442 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 RPS5P46782 204 aaKnown RBP3.54□□□□□ -1.84
ATXN3-242ENST00000556644 RGS6P49758 472 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 EIF2B2P49770 351 aaKnown RBP3.54□□□□□ -1.84
ATXN3-242ENST00000556644 ARFIP1P53367 373 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 PNLIPRP2P54317 469 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 UGT2B15P54855 530 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 RPL15P61313 204 aaKnown RBP3.54□□□□□ -1.84
ATXN3-242ENST00000556644 SNRPGP62308 76 aaKnown RBP3.54□□□□□ -1.84
ATXN3-242ENST00000556644 KCNJ10P78508 379 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 MRPS11P82912 194 aaKnown RBP3.54□□□□□ -1.84
ATXN3-242ENST00000556644 PAX8Q06710 450 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 EGFEM1PQ0D2K5 195 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 ZNF155Q12901 538 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-242ENST00000556644 CHIT1Q13231 466 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 PDE7AQ13946 482 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 IRF3Q14653 427 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 CPSF6Q16630 551 aaKnown RBP eCLIP3.54□□□□□ -1.84
ATXN3-242ENST00000556644 TIGD6Q17RP2 521 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 TBRG1Q3YBR2 411 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 GCNT6Q5T4J0 391 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 OR4F3Q6IEY1 312 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 MED27Q6P2C8 311 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 CASP12Q6UXS9 341 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 CD300LDQ6UXZ3 194 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 ZNF621Q6ZSS3 439 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 TMEM179BQ7Z7N9 219 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 RNF130Q86XS8 419 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 PTOV1Q86YD1 416 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 LYSMD2Q8IV50 215 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 ENTHD1Q8IYW4 607 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 CADM3Q8N126 398 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 STX19Q8N4C7 294 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 KRTCAP2Q8N6L1 136 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 FAM86B1Q8N7N1 296 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 SRFBP1Q8NEF9 429 aaKnown RBP3.54□□□□□ -1.84
ATXN3-242ENST00000556644 OR10G2Q8NGC3 310 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 OR4K14Q8NGD5 310 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 OR4C15Q8NGM1 316 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 OR9Q1Q8NGQ5 310 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 CNIH3Q8TBE1 160 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 ZNF675Q8TD23 568 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 ZFP90Q8TF47 636 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 RAB1CQ92928 201 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 SLC35B4Q969S0 331 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 ESAMQ96AP7 390 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 UPRTQ96BW1 309 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 APIPQ96GX9 242 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 TIMD4Q96H15 378 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 HSH2DQ96JZ2 352 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 FAM71F1Q96KD3 344 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-242ENST00000556644 WDFY2Q96P53 400 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 TSSK3Q96PN8 268 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 TRNT1Q96Q11 434 aaKnown RBP3.54□□□□□ -1.84
ATXN3-242ENST00000556644 COQ7Q99807 217 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 CITED2Q99967 270 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-242ENST00000556644 TBL1XR1Q9BZK7 514 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 MS4A5Q9H3V2 200 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 REEP4Q9H6H4 257 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 NT5DC2Q9H857 520 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 NOX3Q9HBY0 568 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 TMEM165Q9HC07 324 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 CLN6Q9NWW5 311 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 IMPAD1Q9NX62 359 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 DCAF16Q9NXF7 216 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 UPB1Q9UBR1 384 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 OR5V1Q9UGF6 321 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 ANGPT4Q9Y264 503 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 RPL36Q9Y3U8 105 aaKnown RBP3.54□□□□□ -1.84
ATXN3-242ENST00000556644 LYVE1Q9Y5Y7 322 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 V9GYQ6 96 aa3.54□□□□□ -1.84
ATXN3-242ENST00000556644 A0A087WZY1 265 aa3.53□□□□□ -1.84
ATXN3-242ENST00000556644 A0A096LPE4 126 aa3.53□□□□□ -1.84
ATXN3-242ENST00000556644 IGLV3-32A0A0A0MS00 114 aa3.53□□□□□ -1.84
ATXN3-242ENST00000556644 A0A0A6YYD5 115 aa3.53□□□□□ -1.84
ATXN3-242ENST00000556644 A0A1W2PPZ6 126 aa3.53□□□□□ -1.84
ATXN3-242ENST00000556644 FAM172BPA6NC97 362 aa3.53□□□□□ -1.84
ATXN3-242ENST00000556644 ZAR1LA6NP61 321 aa3.53□□□□□ -1.84
ATXN3-242ENST00000556644 BOLA2-SMG1P6H3BVE0 249 aa3.53□□□□□ -1.84
ATXN3-242ENST00000556644 FAAHO00519 579 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms