RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 FASNP49327 2511 aaKnown RBP12.19□□□□□ -0.46
VIPAS39-208ENST00000556412 ATP6V1G2-DDX39BF2Z307 99 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 LYNP07948 512 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 GALK2Q01415 458 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 NAAAQ02083 359 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 TMED1Q13445 227 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 DAZAP2Q15038 168 aaPredicted RBP12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 KRT80Q6KB66 452 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 TMEM200AQ86VY9 491 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 CDC20BQ86Y33 519 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 OR1F12Q8NHA8 337 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 SLC7A6Q92536 515 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 MARVELD3Q96A59 401 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 AMELYQ99218 206 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 ATF6BQ99941 703 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 COPS4Q9BT78 406 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 YIPF3Q9GZM5 350 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 HDHD2Q9H0R4 259 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 OR51B6Q9H340 312 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 RPL36Q9Y3U8 105 aaKnown RBP12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 RNF115Q9Y4L5 304 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 PSMD9O00233 223 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 SYNGR3O43761 229 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 MYF6P23409 242 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 CALCRP30988 508 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 HIST1H3AP68431 136 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 PCK2Q16822 640 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 HIST2H3PS2Q5TEC6 136 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 HIST2H3AQ71DI3 136 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 PAQR4Q8N4S7 273 aaPredicted RBP12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 ZNF454Q8N9F8 522 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 BPIFB6Q8NFQ5 453 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 KBTBD8Q8NFY9 601 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 ST7LQ8TDW4 575 aa12.18□□□□□ -0.46
VIPAS39-208ENST00000556412 LOC100509620A0A075B734 347 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 IGHV2OR16-5A0A0B4J2B6 119 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 ZNF670-ZNF695F2Z2N8 137 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 F5H5K5 113 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 FAM20BO75063 409 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 PLAUP00749 431 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 DBHP09172 617 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 CXCR4P61073 352 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 TLE4Q04727 773 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 C3orf36Q3SXR2 165 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 RFLNBQ8N5W9 214 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 OR10S1Q8NGN2 331 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 OR1J2Q8NGS2 313 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 LGALS12Q96DT0 336 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 PNRC2Q9NPJ4 139 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 IKZF2Q9UKS7 526 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 COPS3Q9UNS2 423 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 TMEM14AQ9Y6G1 99 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 ATP23Q9Y6H3 246 aa12.17□□□□□ -0.46
VIPAS39-208ENST00000556412 OR6C6A6NF89 314 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 ZNF878C9JN71 531 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 XPNPEP2O43895 674 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 H2BFMP0C1H6 154 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 FAM157BP0CG42 384 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 ALOX5APP20292 161 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 VHLLQ6RSH7 139 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 LRRN1Q6UXK5 716 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 ZNF704Q6ZNC4 412 aaPredicted RBP12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 KRT77Q7Z794 578 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 IL17RDQ8NFM7 739 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 POM121L2Q96KW2 1035 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 RHNO1Q9BSD3 238 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 CLEC4MQ9H2X3 399 aaPredicted RBP12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 GRIP1Q9Y3R0 1128 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 N6AMT1Q9Y5N5 214 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 UTP20O75691 2785 aaKnown RBP12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 A0A1W2PQL4 384 aaPredicted RBP12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 FADS2O95864 444 aaKnown RBP12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 OR2T7P0C7T2 308 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 COX5BP10606 129 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 HSD11B1P28845 292 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 SLC15A1P46059 708 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 SLC6A9P48067 706 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 PRKXP51817 358 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 ECH1Q13011 328 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 LAIR2Q6ISS4 152 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 ZNF322Q6U7Q0 402 aaPredicted RBP12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 ZNF295-AS1Q8N0V1 137 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 OR2T27Q8NH04 317 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 FBLIM1Q8WUP2 373 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 NEUROG1Q92886 237 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 SPTSSAQ969W0 71 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 COQ7Q99807 217 aa12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 EIF3KQ9UBQ5 218 aaKnown RBP12.16□□□□□ -0.46
VIPAS39-208ENST00000556412 DAPL1A0PJW8 107 aa12.15□□□□□ -0.46
VIPAS39-208ENST00000556412 MAGEB4O15481 346 aaPredicted RBP12.15□□□□□ -0.46
VIPAS39-208ENST00000556412 CTAG2O75638 210 aa12.15□□□□□ -0.46
VIPAS39-208ENST00000556412 ABHD16AO95870 558 aa12.15□□□□□ -0.46
VIPAS39-208ENST00000556412 ZNF35P13682 527 aa12.15□□□□□ -0.46
VIPAS39-208ENST00000556412 LOXP28300 417 aaPredicted RBP12.15□□□□□ -0.46
VIPAS39-208ENST00000556412 ACTC1P68032 377 aa12.15□□□□□ -0.46
VIPAS39-208ENST00000556412 ACTA1P68133 377 aa12.15□□□□□ -0.46
VIPAS39-208ENST00000556412 RAB40BQ12829 278 aa12.15□□□□□ -0.46
VIPAS39-208ENST00000556412 SNTB2Q13425 540 aaKnown RBP12.15□□□□□ -0.46
VIPAS39-208ENST00000556412 KLHL22Q53GT1 634 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms