RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 VPS37AQ8NEZ2 397 aa5.67□□□□□ -1.5
ATXN3-236ENST00000556220 OR6N1Q8NGY5 312 aa5.67□□□□□ -1.5
ATXN3-236ENST00000556220 PNPT1Q8TCS8 783 aaKnown RBP5.67□□□□□ -1.5
ATXN3-236ENST00000556220 KLF14Q8TD94 323 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-236ENST00000556220 LRRC8CQ8TDW0 803 aa5.67□□□□□ -1.5
ATXN3-236ENST00000556220 IPCEF1Q8WWN9 437 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-236ENST00000556220 TAAR8Q969N4 342 aa5.67□□□□□ -1.5
ATXN3-236ENST00000556220 MARS2Q96GW9 593 aaKnown RBP5.67□□□□□ -1.5
ATXN3-236ENST00000556220 PLEKHA8Q96JA3 519 aa5.67□□□□□ -1.5
ATXN3-236ENST00000556220 TEX37Q96LM6 180 aa5.67□□□□□ -1.5
ATXN3-236ENST00000556220 PPP1R36Q96LQ0 422 aa5.67□□□□□ -1.5
ATXN3-236ENST00000556220 PPP3R2Q96LZ3 170 aa5.67□□□□□ -1.5
ATXN3-236ENST00000556220 SIGLEC11Q96RL6 698 aa5.67□□□□□ -1.5
ATXN3-236ENST00000556220 SH3GL3Q99963 347 aa5.67□□□□□ -1.5
ATXN3-236ENST00000556220 RNF121Q9H920 327 aa5.67□□□□□ -1.5
ATXN3-236ENST00000556220 A4GALTQ9NPC4 353 aa5.67□□□□□ -1.5
ATXN3-236ENST00000556220 SAR1AQ9NR31 198 aa5.67□□□□□ -1.5
ATXN3-236ENST00000556220 ACOXLQ9NUZ1 547 aa5.67□□□□□ -1.5
ATXN3-236ENST00000556220 THAP1Q9NVV9 213 aa5.67□□□□□ -1.5
ATXN3-236ENST00000556220 FIS1Q9Y3D6 152 aa5.67□□□□□ -1.5
ATXN3-236ENST00000556220 TET2Q6N021 2002 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-236ENST00000556220 CENPVL3A0A0U1RRI6 287 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 IQCMA0A1B0GVH7 501 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 C3orf84H3BNL1 204 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 TMEM178BH3BS89 294 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 P2RY10O00398 339 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 HMGN4O00479 90 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 FBP2O00757 339 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 PEX11AO75192 247 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 FARS2O95363 451 aaKnown RBP5.66□□□□□ -1.5
ATXN3-236ENST00000556220 HPRP00739 348 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 NCF2P19878 526 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-236ENST00000556220 EPHA3P29320 983 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 APLNRP35414 380 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 MSX2P35548 267 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-236ENST00000556220 CSNK1A1P48729 337 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 SMN1Q16637 294 aaKnown RBP5.66□□□□□ -1.5
ATXN3-236ENST00000556220 SMU1Q2TAY7 513 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 PGS1Q32NB8 556 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 MTX3Q5HYI7 312 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 SPATA46Q5T0L3 261 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 FAM69AQ5T7M9 428 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 IL23RQ5VWK5 629 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 FAM91A1Q658Y4 838 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 DHRS7BQ6IAN0 325 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-236ENST00000556220 OR4F3Q6IEY1 312 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 SLC27A4Q6P1M0 643 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 WDR88Q6ZMY6 472 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 ASRGL1Q7L266 308 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 PEX5LQ8IYB4 626 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 LILRB2Q8N423 598 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 GALNT4Q8N4A0 578 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 OR4S1Q8NGB4 309 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 OR4A15Q8NGL6 344 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 OR9I1Q8NGQ6 314 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 LRTOMTQ8WZ04 291 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 ARHGDIGQ99819 225 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 C1orf50Q9BV19 199 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 NUF2Q9BZD4 464 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 SLC19A3Q9BZV2 496 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 TRIM15Q9C019 465 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 DPAGT1Q9H3H5 408 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 C11orf21Q9P2W6 132 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 MIOXQ9UGB7 285 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 RAP2CQ9Y3L5 183 aa5.66□□□□□ -1.5
ATXN3-236ENST00000556220 HERC2O95714 4834 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 A0A087WUJ7 227 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 A0A0G2JND7 137 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 PRSS51A0A1B0GVH4 220 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 MGRN1O60291 552 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 CPSF4O95639 269 aaKnown RBP5.65□□□□□ -1.5
ATXN3-236ENST00000556220 FGF4P08620 206 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 PRG2P13727 222 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 RPS2P15880 293 aaKnown RBP5.65□□□□□ -1.5
ATXN3-236ENST00000556220 HOXB9P17482 250 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-236ENST00000556220 CCNOP22674 350 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 CBLP22681 906 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 TNFSF4P23510 183 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 AHCYP23526 432 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 CHI3L1P36222 383 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-236ENST00000556220 CFHR2P36980 270 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 TGFBR2P37173 567 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 WNT5AP41221 380 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 CLDN8P56748 225 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 CD69Q07108 199 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 SLC36A2Q495M3 483 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 LIN52Q52LA3 116 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 C6orf136Q5SQH8 315 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 SLC35E4Q6ICL7 350 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 C5orf46Q6UWT4 87 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 UNQ6126/PRO20091Q6UXV3 157 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 SLC16A14Q7RTX9 510 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 VRK2Q86Y07 508 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 PTOV1Q86YD1 416 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 ZNF101Q8IZC7 436 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 CLIP4Q8N3C7 705 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 C11orf44Q8N8P7 122 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 FNDC5Q8NAU1 212 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 CCDC197Q8NCU1 140 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 OR4K5Q8NGD3 323 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms