RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 FGFBP3Q8TAT2 258 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 THEM6Q8WUY1 208 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 ZNRF4Q8WWF5 429 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 ASB17Q8WXJ9 295 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 UBE2FQ969M7 185 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 SPTSSAQ969W0 71 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 DCLRE1CQ96SD1 692 aaKnown RBP6.64□□□□□ -1.35
TDP1-214ENST00000556063 COQ7Q99807 217 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 WNT5BQ9H1J7 359 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 NIPAL2Q9H841 368 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 SP140LQ9H930 580 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 NPAP1Q9NZP6 1156 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 LAMP5Q9UJQ1 280 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 EDARQ9UNE0 448 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 LHFPL6Q9Y693 200 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 IGHV1-18A0A0C4DH31 117 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 ZNF503-AS2A6NEH8 195 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 ZNF878C9JN71 531 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 ZNF670-ZNF695F2Z2N8 137 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 ABCD4O14678 606 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 SELENOFO60613 162 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 CLIC3O95833 236 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 SCG5P05408 212 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 LYNP07948 512 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 MRPL3P09001 348 aaKnown RBP6.63□□□□□ -1.35
TDP1-214ENST00000556063 OR2T7P0C7T2 308 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 GABRB1P18505 474 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 ALOX5APP20292 161 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 CCNOP22674 350 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 MYF6P23409 242 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 COL8A1P27658 744 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 APEX1P27695 318 aaKnown RBP6.63□□□□□ -1.35
TDP1-214ENST00000556063 RAD52P43351 418 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 RGS6P49758 472 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 TPTEP56180 551 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 ISL1P61371 349 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 RPS23P62266 143 aaKnown RBP6.63□□□□□ -1.35
TDP1-214ENST00000556063 GRB2P62993 217 aaKnown RBP6.63□□□□□ -1.35
TDP1-214ENST00000556063 HIST1H3AP68431 136 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 TLE4Q04727 773 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 MED21Q13503 144 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 HIST2H3PS2Q5TEC6 136 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 OTPQ5XKR4 325 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 KRT80Q6KB66 452 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 TMEM154Q6P9G4 183 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 LYPD4Q6UWN0 246 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 B3GLCTQ6Y288 498 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 USP51Q70EK9 711 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 HIST2H3AQ71DI3 136 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 VASH1Q7L8A9 365 aaPredicted RBP6.63□□□□□ -1.35
TDP1-214ENST00000556063 BCDIN3DQ7Z5W3 292 aaKnown RBP6.63□□□□□ -1.35
TDP1-214ENST00000556063 TMEM200AQ86VY9 491 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 CDC20BQ86Y33 519 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 SLC35F2Q8IXU6 374 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 OR2T27Q8NH04 317 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 OTOSQ8NHW6 89 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 SLAMF6Q96DU3 332 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 RNFT2Q96EX2 444 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 COG8Q96MW5 612 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 ZNF75AQ96N20 296 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 ATF6BQ99941 703 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 COPS4Q9BT78 406 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 ABHD6Q9BV23 337 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 ANKRD60Q9BZ19 345 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 ELOVL3Q9HB03 270 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 ADGRL4Q9HBW9 690 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 NOX3Q9HBY0 568 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 CENPMQ9NSP4 180 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 SCN3BQ9NY72 215 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 BAHCC1Q9P281 2608 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 ATP23Q9Y6H3 246 aa6.63□□□□□ -1.35
TDP1-214ENST00000556063 IGHV2OR16-5A0A0B4J2B6 119 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 C5orf49A4QMS7 147 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 EFCAB10A6NFE3 127 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 J3QW42 95 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 SYNGR3O43761 229 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 ZNF254O75437 659 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 CTAG2O75638 210 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 ABHD16AO95870 558 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 CELA3BP08861 270 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 GNAO1P09471 354 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 H2BFMP0C1H6 154 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 DBTP11182 482 aaKnown RBP6.62□□□□□ -1.35
TDP1-214ENST00000556063 ZNF35P13682 527 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 TUBG1P23258 451 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 HSD11B1P28845 292 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 PCSK6P29122 969 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 RPS27P42677 84 aaKnown RBP6.62□□□□□ -1.35
TDP1-214ENST00000556063 SELENOVP59797 346 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 CXCR4P61073 352 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 ZNF91Q05481 1191 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 DBPQ10586 325 aaPredicted RBP6.62□□□□□ -1.35
TDP1-214ENST00000556063 RAB40BQ12829 278 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 CDK5R2Q13319 367 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 CCDC92Q53HC0 331 aaPredicted RBP6.62□□□□□ -1.35
TDP1-214ENST00000556063 ADAM5Q6NVV9 412 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 DEGS2Q6QHC5 323 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 ZNF704Q6ZNC4 412 aaPredicted RBP6.62□□□□□ -1.35
TDP1-214ENST00000556063 CFAP77Q6ZQR2 320 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 PLEKHG7Q6ZR37 379 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms