RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 DNAJB5O75953 348 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 C1orf140Q5VVS0 124 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 FADS6Q8N9I5 356 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 RTP4Q96DX8 246 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF764Q96H86 408 aaPredicted RBP6.32□□□□□ -1.4
SYNE2-216ENST00000555002 DHRS4Q9BTZ2 278 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 BCO1Q9HAY6 547 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 DHCR7Q9UBM7 475 aaKnown RBP6.32□□□□□ -1.4
SYNE2-216ENST00000555002 A0A1B0GTW7 788 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 SLC22A20A6NK97 555 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 H3BVH4 76 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 YKT6O15498 198 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 TNFSF15O95150 251 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 SDC1P18827 310 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 RAB40BQ12829 278 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 GLCCI1Q86VQ1 547 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 OR13D1Q8NGV5 346 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 INSM2Q96T92 566 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 MAGT1Q9H0U3 335 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 C7P10643 843 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 ARR3P36575 388 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 C17orf67Q0P5P2 114 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 CXorf67Q86X51 503 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 OR1J1Q8NGS3 322 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 C1GALT1Q9NS00 363 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 SPTAN1Q13813 2472 aaKnown RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF142P52746 1687 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 SETD1AO15047 1707 aaKnown RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 DUSP1P28562 367 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 GDNFP39905 211 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 CNN1P51911 297 aaKnown RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 HNRNPA3P51991 378 aaKnown RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF816Q0VGE8 651 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 ETFRF1Q6IPR1 90 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 LRRC56Q8IYG6 542 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 OR10V1Q8NGI7 309 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 TNFRSF13CQ96RJ3 184 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 SLC22A12Q96S37 553 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 IL37Q9NZH6 218 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 TRAPPC4Q9Y296 219 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 MKRN2OSH3BPM6 223 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 GJB3O75712 270 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 ALOX5APP20292 161 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 TACR1P25103 407 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 SLC10A2Q12908 348 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 ARFGAP1Q8N6T3 406 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 NUP37Q8NFH4 326 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 BCL2L2Q92843 193 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF300Q96RE9 604 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 USP22Q9UPT9 525 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 SCN9AQ15858 1988 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 BCL9LQ86UU0 1499 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 FREM3P0C091 2139 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 ANKRD36CQ5JPF3 1778 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 C9orf172C9J069 976 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 MS4A18H0YCH9 400 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 RFXAPO00287 272 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 CDX4O14627 284 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 ADAM11O75078 769 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 TCTN1Q2MV58 587 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 SMIM21Q3B7S5 101 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 MS4A18Q3C1V0 323 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 LCN8Q6JVE9 175 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 FAM3DQ96BQ1 224 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 PDGFBP01127 241 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 FBP1P09467 338 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 H2AFB1P0C5Y9 115 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 BMP5P22003 454 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 DGAT2L7PQ6IED9 249 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 PGBD5Q8N414 524 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 L3HYPDHQ96EM0 354 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 ATP5SQ99766 215 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 NTN4Q9HB63 628 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 COA4Q9NYJ1 87 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 STRAPQ9Y3F4 350 aaKnown RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 RGPD2P0DJD1 1756 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 FIGNL2A6NMB9 653 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 AQP8O94778 261 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 PMCHP20382 165 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 TBXA2RP21731 343 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 COX7A1P24310 79 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 CYHR1Q6ZMK1 362 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 H1FNTQ75WM6 255 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 KMT5CQ86Y97 462 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 LGI3Q8N145 548 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 TAAR6Q96RI8 345 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 HELTA6NFD8 242 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 MMP7P09237 267 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 MRPS10P82664 201 aaKnown RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 EXT1Q16394 746 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 LEXMQ3ZCV2 418 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 THEM4Q5T1C6 240 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 ADAMTS14Q8WXS8 1223 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 TMEM106AQ96A25 262 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 TMEM147Q9BVK8 224 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 SNX11Q9Y5W9 270 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 C10orf71Q711Q0 1435 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 A0A1W2PNR3 127 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 RRASP10301 218 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 PCSK6P29122 969 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms