RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 FAM166AQ6J272 317 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 TMEM251Q8N6I4 163 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 IL22RA1Q8N6P7 574 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 CLEC1AQ8NC01 280 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 OR10D3Q8NH80 312 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 TMEM45BQ96B21 275 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 CMTM3Q96MX0 182 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 SP140LQ9H930 580 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 DDX28Q9NUL7 540 aaKnown RBP7.87□□□□□ -1.15
TDP1-210ENST00000554976 TEKT2Q9UIF3 430 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 RCE1Q9Y256 329 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 SSUH2Q9Y2M2 353 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 NKX2-8O15522 239 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 HLA-DQA2P01906 255 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 RAF1P04049 648 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 SPNP16150 400 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 FSTP19883 344 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 NPR2P20594 1047 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 CTSSP25774 331 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 CASRP41180 1078 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 MAGEA5P43359 124 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 STARP49675 285 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 MMP16P51512 607 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 P2RY14Q15391 338 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 SPANXN2Q5MJ10 180 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 CNIH2Q6PI25 160 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 KCTD18Q6PI47 426 aaPredicted RBP7.86□□□□□ -1.15
TDP1-210ENST00000554976 CORO6Q6QEF8 472 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 CCBE1Q6UXH8 406 aaPredicted RBP7.86□□□□□ -1.15
TDP1-210ENST00000554976 STAC2Q6ZMT1 411 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 Q6ZSR3 168 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 OR5H6Q8NGV6 325 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 SLAMF6Q96DU3 332 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 RBP7Q96R05 134 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 SLC22A13Q9Y226 551 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 A0A1W2PPK0 400 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 ARGFXA6NJG6 315 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 EIF1AYO14602 144 aaKnown RBP7.86□□□□□ -1.15
TDP1-210ENST00000554976 SHOXO15266 292 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 EFSO43281 561 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 SLC2A2P11168 524 aaPredicted RBP7.86□□□□□ -1.15
TDP1-210ENST00000554976 NR4A2P43354 598 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 MEOX1P50221 254 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 LSM6P62312 80 aaKnown RBP7.86□□□□□ -1.15
TDP1-210ENST00000554976 OR7E24Q6IFN5 339 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 SLC25A25Q6KCM7 469 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 ZNF529Q6P280 563 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 LINC00696Q6ZRV3 163 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 LRRC28Q86X40 367 aaPredicted RBP7.86□□□□□ -1.15
TDP1-210ENST00000554976 RDH10Q8IZV5 341 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 INTS12Q96CB8 462 aaKnown RBP7.86□□□□□ -1.15
TDP1-210ENST00000554976 ZNF845Q96IR2 970 aaPredicted RBP7.86□□□□□ -1.15
TDP1-210ENST00000554976 EMC7Q9NPA0 242 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 ACKR4Q9NPB9 350 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 ABI3Q9P2A4 366 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 IKZF2Q9UKS7 526 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 LIPGQ9Y5X9 500 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 IL7P13232 177 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 RFX2P48378 723 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 RIDAP52758 137 aaKnown RBP7.86□□□□□ -1.15
TDP1-210ENST00000554976 CARD18P57730 90 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 OC90Q02509 493 aaPredicted RBP7.86□□□□□ -1.15
TDP1-210ENST00000554976 RSPO1Q2MKA7 263 aaPredicted RBP7.86□□□□□ -1.15
TDP1-210ENST00000554976 RNFT1Q5M7Z0 435 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 IDNKQ5T6J7 187 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 CARD17Q5XLA6 110 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 KRT77Q7Z794 578 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 SLC22A16Q86VW1 577 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 GDPD1Q8N9F7 314 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 ASB5Q8WWX0 329 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 ZNF837Q96EG3 531 aaPredicted RBP7.86□□□□□ -1.15
TDP1-210ENST00000554976 SFXN2Q96NB2 322 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 AGAP4Q96P64 663 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 ZDHHC11Q9H8X9 412 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 ABRACLQ9P1F3 81 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 COMMD3Q9UBI1 195 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 GDF2Q9UK05 429 aaPredicted RBP7.86□□□□□ -1.15
TDP1-210ENST00000554976 CSAG2Q9Y5P2 127 aa7.86□□□□□ -1.15
TDP1-210ENST00000554976 IFITM5A6NNB3 132 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 TRIM77I1YAP6 450 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 AIPO00170 330 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 CXCL13O43927 109 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 SSX4O60224 188 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 TTRP02766 147 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 FAM157BP0CG42 384 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 CCL1P22362 96 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 OTX1P32242 354 aaPredicted RBP7.85□□□□□ -1.15
TDP1-210ENST00000554976 STK11Q15831 433 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 MZT2AQ6P582 158 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 CPNE4Q96A23 557 aaPredicted RBP7.85□□□□□ -1.15
TDP1-210ENST00000554976 SLC25A38Q96DW6 304 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 SLC25A18Q9H1K4 315 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 NELFAQ9H3P2 528 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 RNF122Q9H9V4 155 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 KLF13Q9Y2Y9 288 aaPredicted RBP7.85□□□□□ -1.15
TDP1-210ENST00000554976 TTC28Q96AY4 2481 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 A0A0B4J203 849 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 A0A1B0GTI1 187 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 A0A1W2PPL8 197 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 E9PLN8 166 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms