RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SERPINB11Q96P15 392 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF184Q99676 751 aaPredicted RBP1.09□□□□□ -2.24
PRPF39-208ENST00000554785 FOXC2Q99958 501 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 ERP44Q9BS26 406 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 YTHDF1Q9BYJ9 559 aaKnown RBP1.09□□□□□ -2.24
PRPF39-208ENST00000554785 NXF5Q9H1B4 397 aaKnown RBP1.09□□□□□ -2.24
PRPF39-208ENST00000554785 RMND5AQ9H871 391 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 AGPAT3Q9NRZ7 376 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 CISHQ9NSE2 258 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 RNF14Q9UBS8 474 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 FARSAQ9Y285 508 aaKnown RBP1.09□□□□□ -2.24
PRPF39-208ENST00000554785 MRPS7Q9Y2R9 242 aaKnown RBP1.09□□□□□ -2.24
PRPF39-208ENST00000554785 MAB21L2Q9Y586 359 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 ALG6Q9Y672 507 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 KIF25-AS1Q9Y6Z4 181 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 PRKDCP78527 4128 aaKnown RBP1.08□□□□□ -2.24
PRPF39-208ENST00000554785 WNK2Q9Y3S1 2297 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 VWFP04275 2813 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 NINQ8N4C6 2090 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF705EA8MWA4 302 aaPredicted RBP1.08□□□□□ -2.24
PRPF39-208ENST00000554785 G3V4G9 280 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 K7EQM0 130 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 CTAG2O75638 210 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 LRATO95237 230 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 LYPD3O95274 346 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 IGLV3-27P01718 113 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 OR8U8P0C7N1 319 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 PNMA6AP0CW24 399 aaPredicted RBP1.08□□□□□ -2.24
PRPF39-208ENST00000554785 PRG2P13727 222 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 IGLL1P15814 213 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 NTSP30990 170 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 GTF2H1P32780 548 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 CD80P33681 288 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 GPR1P46091 355 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 SULT1E1P49888 294 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 PPT1P50897 306 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 MAXP61244 160 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 NDPQ00604 133 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 SLC10A7Q0GE19 358 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 CUL1Q13616 776 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 MESDQ14696 234 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 NCF4Q15080 339 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 DEFB113Q30KQ7 82 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 FILIP1LQ4L180 1135 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 CARD16Q5EG05 197 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 ATL3Q6DD88 541 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 KCNIP4Q6PIL6 250 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 XKRXQ6PP77 449 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 SYT10Q6XYQ8 523 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 Q6ZS92 163 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 TPRA1Q86W33 373 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 PPP1R27Q86WC6 154 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 C17orf82Q86X59 251 aaPredicted RBP1.08□□□□□ -2.24
PRPF39-208ENST00000554785 SKA3Q8IX90 412 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 PRR22Q8IZ63 422 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 DEFB106AQ8N104 65 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 CEND1Q8N111 149 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 ARHGAP18Q8N392 663 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 DHRSXQ8N5I4 330 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 KIR3DL3Q8N743 410 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 ATP6V0D2Q8N8Y2 350 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 DCAF4L2Q8NA75 395 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 SYT14Q8NB59 555 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF540Q8NDQ6 660 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 OR10H4Q8NGA5 316 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 OR6C4Q8NGE1 309 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 OR5L2Q8NGL0 311 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 TRMT10AQ8TBZ6 339 aaKnown RBP1.08□□□□□ -2.24
PRPF39-208ENST00000554785 ANKRD49Q8WVL7 239 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 SLC5A11Q8WWX8 675 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 NEIL2Q969S2 332 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 FAM131CQ96AQ9 280 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 C16orf74Q96GX8 76 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 SH3YL1Q96HL8 342 aaPredicted RBP1.08□□□□□ -2.24
PRPF39-208ENST00000554785 BTN2A3PQ96KV6 586 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 C9orf72Q96LT7 481 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 AMDHD1Q96NU7 426 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 OR2M4Q96R27 311 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 IL4I1Q96RQ9 567 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF607Q96SK3 696 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 MCHR1Q99705 422 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 CNPY3Q9BT09 278 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 CHIAQ9BZP6 476 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 NMUR2Q9GZQ4 415 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 POLR1EQ9GZS1 481 aaKnown RBP1.08□□□□□ -2.24
PRPF39-208ENST00000554785 NAT10Q9H0A0 1025 aaKnown RBP1.08□□□□□ -2.24
PRPF39-208ENST00000554785 GLIPR2Q9H4G4 154 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 EHD1Q9H4M9 534 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF385DQ9H6B1 395 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 PTGES2Q9H7Z7 377 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 ISG20L2Q9H9L3 353 aaKnown RBP1.08□□□□□ -2.24
PRPF39-208ENST00000554785 LRTM1Q9HBL6 345 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF160Q9HCG1 818 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 FBXO8Q9NRD0 319 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 IMP3Q9NV31 184 aaKnown RBP1.08□□□□□ -2.24
PRPF39-208ENST00000554785 B3GNT2Q9NY97 397 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 IL37Q9NZH6 218 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 STOX2Q9P2F5 926 aaPredicted RBP1.08□□□□□ -2.24
PRPF39-208ENST00000554785 ONECUT1Q9UBC0 465 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 RPH3ALQ9UNE2 315 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms