RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ZNF331Q9NQX6 463 aaPredicted RBP12.73□□□□□ -0.37
VTI1B-204ENST00000554659 TBC1D29Q9UFV1 150 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 SEC14L6B5MCN3 397 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 TBPP20226 339 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 NLRC3Q7RTR2 1065 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 SPPL3Q8TCT6 385 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 UCN3Q969E3 161 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 LAT2Q9GZY6 243 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 MED9Q9NWA0 146 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 ZNF891A8MT65 544 aaPredicted RBP12.73□□□□□ -0.37
VTI1B-204ENST00000554659 ZNF587BE7ETH6 402 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 DVL1O14640 695 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 ALOX12BO75342 701 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 GSTP1P09211 210 aaKnown RBP12.73□□□□□ -0.37
VTI1B-204ENST00000554659 CD80P33681 288 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 SOX18P35713 384 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 DVL1P1P54792 670 aaPredicted RBP12.73□□□□□ -0.37
VTI1B-204ENST00000554659 HSF1Q00613 529 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 TRIM61Q5EBN2 209 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 BANF2Q9H503 90 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 TMEFF2Q9UIK5 374 aaPredicted RBP12.73□□□□□ -0.37
VTI1B-204ENST00000554659 ZNF346Q9UL40 294 aaKnown RBP12.73□□□□□ -0.37
VTI1B-204ENST00000554659 TMEM235A6NFC5 223 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 NME2P1O60361 137 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 IGFBP6P24592 240 aaPredicted RBP12.72□□□□□ -0.37
VTI1B-204ENST00000554659 PSMB6P28072 239 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 OR2B8PP59922 312 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 DBX2Q6ZNG2 339 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 UTP23Q9BRU9 249 aaKnown RBP12.72□□□□□ -0.37
VTI1B-204ENST00000554659 NRAPQ86VF7 1730 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 TRAV1-2A0A0B4J238 106 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.72□□□□□ -0.37
VTI1B-204ENST00000554659 TRIM77I1YAP6 450 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 AKR7A3O95154 331 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 ALOX5APP20292 161 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 FCER1GP30273 86 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 ADPRHP54922 357 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 SSBP1Q04837 148 aaKnown RBP12.72□□□□□ -0.37
VTI1B-204ENST00000554659 ACKR1Q16570 336 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 WBP2Q969T9 261 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 TVP23CQ96ET8 276 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 GAREM1Q9H706 876 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 PLEKHF2Q9H8W4 249 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 SPACA1Q9HBV2 294 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 ZNF355PQ9NSJ1 428 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 B3GAT1Q9P2W7 334 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 V9GYS6 101 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 N4BP2Q86UW6 1770 aaPredicted RBP12.72□□□□□ -0.37
VTI1B-204ENST00000554659 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 OR5H14A6NHG9 310 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 LGALS8O00214 317 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 CSNK1EP49674 416 aaKnown RBP12.72□□□□□ -0.37
VTI1B-204ENST00000554659 RAB35Q15286 201 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 DCAF12Q5T6F0 453 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 NKAIN2Q5VXU1 208 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 TMEM182Q6ZP80 229 aaPredicted RBP12.72□□□□□ -0.37
VTI1B-204ENST00000554659 CDH26Q8IXH8 852 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 MAML2Q8IZL2 1156 aaPredicted RBP12.72□□□□□ -0.37
VTI1B-204ENST00000554659 SLAMF6Q96DU3 332 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 LINC00615Q96LM1 132 aaPredicted RBP12.72□□□□□ -0.37
VTI1B-204ENST00000554659 SLIRPQ9GZT3 109 aaKnown RBP12.72□□□□□ -0.37
VTI1B-204ENST00000554659 NKX2-1P43699 371 aaPredicted RBP12.72□□□□□ -0.37
VTI1B-204ENST00000554659 VHLLQ6RSH7 139 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 STAC2Q6ZMT1 411 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 OR13C5Q8NGS8 318 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 ZNF768Q9H5H4 540 aaKnown RBP12.72□□□□□ -0.37
VTI1B-204ENST00000554659 PADI1Q9ULC6 663 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 PHIPQ8WWQ0 1821 aa12.72□□□□□ -0.37
VTI1B-204ENST00000554659 UPK1AO00322 258 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 PDGFBP01127 241 aaPredicted RBP12.71□□□□□ -0.37
VTI1B-204ENST00000554659 TPOP07202 933 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 C12orf73Q69YU5 71 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 STT3BQ8TCJ2 826 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 TMED6Q8WW62 240 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 NRSN2Q9GZP1 204 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 NXPH2O95156 264 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 CLEC3BP05452 202 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 CTXN2P0C2S0 81 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 ADRA2CP18825 462 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 TAF9Q16594 264 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 NKG7Q16617 165 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 XAF1Q6GPH4 301 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 OR2AK2Q8NG84 335 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 OR11L1Q8NGX0 322 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 BAHD1Q8TBE0 780 aaPredicted RBP12.71□□□□□ -0.37
VTI1B-204ENST00000554659 SMIM4Q8WVI0 70 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 TMEM231Q9H6L2 316 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 PISDQ9UG56 409 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 BTBD17A6NE02 478 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 UMAD1C9J7I0 102 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 TIMM8AO60220 97 aaPredicted RBP12.71□□□□□ -0.37
VTI1B-204ENST00000554659 NTF3P20783 257 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 PPICP45877 212 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 LBX1P52954 281 aa12.71□□□□□ -0.37
VTI1B-204ENST00000554659 STRAPQ9Y3F4 350 aaKnown RBP12.71□□□□□ -0.37
VTI1B-204ENST00000554659 ASPDHA6ND91 283 aa12.71□□□□□ -0.38
VTI1B-204ENST00000554659 RAB27BO00194 218 aa12.71□□□□□ -0.38
VTI1B-204ENST00000554659 ZNF749O43361 778 aa12.71□□□□□ -0.38
VTI1B-204ENST00000554659 VAMP5O95183 116 aa12.71□□□□□ -0.38
VTI1B-204ENST00000554659 GSK3AP49840 483 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms