RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 XPNPEP2O43895 674 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 ATP6V1B1P15313 513 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 ZNF14P17017 642 aaPredicted RBP9.1□□□□□ -0.95
SHMT2-215ENST00000554656 SLC15A1P46059 708 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 FXYD6P3P58550 94 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 FHL1Q13642 323 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 C1DQ13901 141 aaKnown RBP9.1□□□□□ -0.95
SHMT2-215ENST00000554656 ZNF74Q16587 644 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 CARD17Q5XLA6 110 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 H1FNTQ75WM6 255 aaPredicted RBP9.1□□□□□ -0.95
SHMT2-215ENST00000554656 C20orf196Q8IYI0 205 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 IQCF1Q8N6M8 205 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 TCEANCQ8N8B7 351 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 ZNF540Q8NDQ6 660 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 OR13C2Q8NGS9 318 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 RFKQ969G6 155 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 UBE2FQ969M7 185 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 C1orf159Q96HA4 380 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 TXNDC15Q96J42 360 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 SAMD8Q96LT4 415 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 SNX18Q96RF0 628 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 RAB1BQ9H0U4 201 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 TPK1Q9H3S4 243 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 NANSQ9NR45 359 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 CMC2Q9NRP2 79 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 MRPS18AQ9NVS2 196 aaKnown RBP9.1□□□□□ -0.95
SHMT2-215ENST00000554656 MED29Q9NX70 200 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 RPL36Q9Y3U8 105 aaKnown RBP9.1□□□□□ -0.95
SHMT2-215ENST00000554656 DPPA5A6NC42 116 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 CH25HO95992 272 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 IFNGP01579 166 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 ADRA2AP08913 450 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 ASAH2BP0C7U1 165 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 NR4A1P22736 598 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 APEX1P27695 318 aaKnown RBP9.09□□□□□ -0.95
SHMT2-215ENST00000554656 ARR3P36575 388 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 CDH15P55291 814 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 ARMC4Q5T2S8 1044 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 RNLSQ5VYX0 342 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 NXNL2Q5VZ03 156 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 DPY19L2P2Q6ZN68 376 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 ZNF627Q7L945 461 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 GID4Q8IVV7 300 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 UEVLDQ8IX04 471 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 SPARTQ8N0X7 666 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 OR4Q3Q8NH05 313 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 NEU4Q8WWR8 484 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-215ENST00000554656 FCGR1BQ92637 280 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 IL4I1Q96RQ9 567 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 MRPL37Q9BZE1 423 aaKnown RBP9.09□□□□□ -0.95
SHMT2-215ENST00000554656 MOV10Q9HCE1 1003 aaKnown RBP9.09□□□□□ -0.95
SHMT2-215ENST00000554656 MYEF2Q9P2K5 600 aaKnown RBP9.09□□□□□ -0.95
SHMT2-215ENST00000554656 KLHL21Q9UJP4 597 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.09□□□□□ -0.95
SHMT2-215ENST00000554656 CORINQ9Y5Q5 1042 aa9.09□□□□□ -0.95
SHMT2-215ENST00000554656 RIIAD1A6NNX1 92 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 AKAP8O43823 692 aaKnown RBP9.08□□□□□ -0.96
SHMT2-215ENST00000554656 PRKYO43930 277 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 ENTPD6O75354 484 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 TXNDC12O95881 172 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 HIST1H2ABP04908 130 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 CDK1P06493 297 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 HTR1AP08908 422 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 CD79AP11912 226 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 ZNF35P13682 527 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 B4GALT1P15291 398 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 HNF1AP20823 631 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 CAPZA2P47755 286 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 POU3F1Q03052 451 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-215ENST00000554656 PIGFQ07326 219 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 CAMK2DQ13557 499 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 TBCEQ15813 527 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-215ENST00000554656 SMN1Q16637 294 aaKnown RBP9.08□□□□□ -0.96
SHMT2-215ENST00000554656 KLHL22Q53GT1 634 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 ELFN2Q5R3F8 820 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 AADACL4Q5VUY2 407 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 THSD4Q6ZMP0 1018 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 ZNF813Q6ZN06 617 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 KCTD8Q6ZWB6 473 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 HIST3H2AQ7L7L0 130 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 NANOGNBQ7Z5D8 188 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 LRP11Q86VZ4 500 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 MEX3DQ86XN8 651 aaKnown RBP9.08□□□□□ -0.96
SHMT2-215ENST00000554656 SCAIQ8N9R8 606 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 OR51A7Q8NH64 312 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 FGFBP3Q8TAT2 258 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 UBASH3BQ8TF42 649 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 GGHQ92820 318 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 HIST1H2ACQ93077 130 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 MRPL24Q96A35 216 aaKnown RBP9.08□□□□□ -0.96
SHMT2-215ENST00000554656 LRR1Q96L50 414 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 COPS4Q9BT78 406 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 IFT27Q9BW83 186 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 DYNLRB1Q9NP97 96 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 NRIP3Q9NQ35 241 aa9.08□□□□□ -0.96
SHMT2-215ENST00000554656 PAK1IP1Q9NWT1 392 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-215ENST00000554656 MRPL39Q9NYK5 338 aaKnown RBP9.08□□□□□ -0.96
SHMT2-215ENST00000554656 TRAV27A0A087WT01 109 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 NPIPB13A6NJU9 1138 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 NPIPB4C9JG80 1138 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms