RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 KLK9Q9UKQ9 250 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 SLC5A6Q9Y289 635 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 UBE2J1Q9Y385 318 aaPredicted RBP3.05□□□□□ -1.92
SEC23A-207ENST00000554615 FAM96BQ9Y3D0 163 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 CHCHD2Q9Y6H1 151 aaPredicted RBP3.05□□□□□ -1.92
SEC23A-207ENST00000554615 YLPM1P49750 1951 aaKnown RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 ERAL1O75616 437 aaKnown RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 SEMA4FO95754 770 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 POU2F1P14859 743 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 TNNI3P19429 210 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 CELP19835 753 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 PAICSP22234 425 aaKnown RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 FPR2P25090 351 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 AKT2P31751 481 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 DGKEP52429 567 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 CAV3P56539 151 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 FGL1Q08830 312 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 TRA2AQ13595 282 aaKnown RBP eCLIP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 ENDOGQ14249 297 aaKnown RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 PYDC2Q56P42 97 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 ALG10BQ5I7T1 473 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 FAM27D1Q5T7N8 215 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 RSBN1Q5VWQ0 802 aaPredicted RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 GLT8D1Q68CQ7 371 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 AWAT2Q6E213 333 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 C11orf87Q6NUJ2 197 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 ZNF227Q86WZ6 799 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 OR4N2Q8NGD1 307 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 OR51T1Q8NGJ9 327 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 OR4D5Q8NGN0 318 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 OR4C3Q8NH37 302 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 FCAMRQ8WWV6 532 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 OTULINQ96BN8 352 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 PIK3IP1Q96FE7 263 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 CABLES2Q9BTV7 478 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 CCDC90BQ9GZT6 254 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 MED20Q9H944 212 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 LRIT1Q9P2V4 623 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 B3GALT5Q9Y2C3 310 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 LRP12Q9Y561 859 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 H7C1Q1 480 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 PYCARD-AS1I3L0S3 204 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 CHRM2P08172 466 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 IL6RP08887 468 aaPredicted RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 ANOS1P23352 680 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 NFYAP23511 347 aaPredicted RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 LUMP51884 338 aaPredicted RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 TPD52P55327 224 aaPredicted RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 ARPC4P59998 168 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 HSF1Q00613 529 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 PLIN5Q00G26 463 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 FOXD4Q12950 439 aaPredicted RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 SMAD4Q13485 552 aaKnown RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 PCOLCEQ15113 449 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 C14orf28Q4W4Y0 310 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 THEM4Q5T1C6 240 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 RAB11FIP2Q7L804 512 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 RRM2BQ7LG56 351 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 DEFB128Q7Z7B8 93 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 SKA3Q8IX90 412 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 SLC38A6Q8IZM9 456 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 UBE2J2Q8N2K1 259 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 MUC20Q8N307 709 aaPredicted RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 LRRC18Q8N456 261 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 ZIC4Q8N9L1 334 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 ZSCAN4Q8NAM6 433 aaPredicted RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 PXT1Q8NFP0 134 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 OR5D14Q8NGL3 314 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 RIT1Q92963 219 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 SHDQ96IW2 340 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 TMEM56Q96MV1 263 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 AIFM2Q9BRQ8 373 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 SEC11CQ9BY50 192 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 CHODLQ9H9P2 273 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 HES4Q9HCC6 221 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 AMBNQ9NP70 447 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 FBXO4Q9UKT5 387 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 ZDHHC8Q9ULC8 765 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 ING4Q9UNL4 249 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 TMEM56-RWDD3S4R434 201 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 SPENQ96T58 3664 aaKnown RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 TRAV27A0A087WT01 109 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 IGHV1OR21-1A0A087WYE8 117 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 IGKV1-9A0A0C4DH69 117 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 A0A1W2PPL8 197 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 C9orf170A2RU37 121 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 CRYM-AS1A6NIL9 109 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 A8MU76 341 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 YKT6O15498 198 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 LINC01565O15544 149 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 SYNGR3O43761 229 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 SNRPBP14678 240 aaKnown RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 AGAP20933 346 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 CRABP1P29762 137 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 GDI1P31150 447 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 GATA4P43694 442 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 SRP9P49458 86 aaKnown RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 NKX2-5P52952 324 aaPredicted RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 TMEM50BP56557 158 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms