RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 EGR4Q05215 589 aa11.03□□□□□ -0.64
SHMT2-207ENST00000553837 SKP2Q13309 424 aa11.03□□□□□ -0.64
SHMT2-207ENST00000553837 PEA15Q15121 130 aa11.03□□□□□ -0.64
SHMT2-207ENST00000553837 LINC01590Q5TEZ4 76 aa11.03□□□□□ -0.64
SHMT2-207ENST00000553837 LPCAT3Q6P1A2 487 aa11.03□□□□□ -0.64
SHMT2-207ENST00000553837 RBMS3Q6XE24 437 aaKnown RBP11.03□□□□□ -0.64
SHMT2-207ENST00000553837 PRR22Q8IZ63 422 aa11.03□□□□□ -0.64
SHMT2-207ENST00000553837 GTPBP8Q8N3Z3 284 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-207ENST00000553837 STEAP2Q8NFT2 490 aa11.03□□□□□ -0.64
SHMT2-207ENST00000553837 PHOSPHO1Q8TCT1 267 aa11.03□□□□□ -0.64
SHMT2-207ENST00000553837 Q96M85 177 aa11.03□□□□□ -0.64
SHMT2-207ENST00000553837 CHST6Q9GZX3 395 aa11.03□□□□□ -0.64
SHMT2-207ENST00000553837 POFUT1Q9H488 388 aa11.03□□□□□ -0.64
SHMT2-207ENST00000553837 TCF7L1Q9HCS4 588 aa11.03□□□□□ -0.64
SHMT2-207ENST00000553837 PNO1Q9NRX1 252 aaKnown RBP11.03□□□□□ -0.64
SHMT2-207ENST00000553837 METTL1Q9UBP6 276 aaKnown RBP11.03□□□□□ -0.64
SHMT2-207ENST00000553837 PLEKHA6Q9Y2H5 1048 aa11.03□□□□□ -0.64
SHMT2-207ENST00000553837 ZNF337Q9Y3M9 751 aa11.03□□□□□ -0.64
SHMT2-207ENST00000553837 FITM1A5D6W6 292 aa11.02□□□□□ -0.65
SHMT2-207ENST00000553837 C1orf196B1AJZ1 125 aa11.02□□□□□ -0.65
SHMT2-207ENST00000553837 F5H0A9 414 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-207ENST00000553837 MELTFP08582 738 aa11.02□□□□□ -0.65
SHMT2-207ENST00000553837 OR4E1P0C645 316 aa11.02□□□□□ -0.65
SHMT2-207ENST00000553837 STARD6P59095 220 aa11.02□□□□□ -0.65
SHMT2-207ENST00000553837 VWA2Q5GFL6 755 aa11.02□□□□□ -0.65
SHMT2-207ENST00000553837 STPG1Q5TH74 334 aa11.02□□□□□ -0.65
SHMT2-207ENST00000553837 ATG4DQ86TL0 474 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-207ENST00000553837 LRRC75AQ8NAA5 344 aa11.02□□□□□ -0.65
SHMT2-207ENST00000553837 WNT2BQ93097 391 aa11.02□□□□□ -0.65
SHMT2-207ENST00000553837 RNF122Q9H9V4 155 aa11.02□□□□□ -0.65
SHMT2-207ENST00000553837 TREM1Q9NP99 234 aa11.02□□□□□ -0.65
SHMT2-207ENST00000553837 ZNF230Q9UIE0 474 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-207ENST00000553837 CA14Q9ULX7 337 aa11.02□□□□□ -0.65
SHMT2-207ENST00000553837 ABCA7Q8IZY2 2146 aa11.02□□□□□ -0.65
SHMT2-207ENST00000553837 A0A1B0GV90 55 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 BLACEA4D250 179 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 TMEM200CA6NKL6 621 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 OR2AT4A6NND4 320 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 METTL12A8MUP2 240 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 BLOC1S5-TXNDC5H3BN57 136 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 ARPC3O15145 178 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 ITGB2P05107 769 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 CD27P26842 260 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 DLSTP36957 453 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 CCR4P51679 360 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 SCAND1P57086 179 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 SKP1P63208 163 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 HABP2Q14520 560 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-207ENST00000553837 TTLL10Q6ZVT0 673 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 GKN2Q86XP6 184 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 MISPQ8IVT2 679 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 ZNF511Q8NB15 262 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 OR6K6Q8NGW6 343 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 ADAMTS18Q8TE60 1221 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 SLC39A7Q92504 469 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 LURAP1Q96LR2 239 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 NRSN2Q9GZP1 204 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 PDE7BQ9NP56 450 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 DHCR7Q9UBM7 475 aaKnown RBP11.01□□□□□ -0.65
SHMT2-207ENST00000553837 GHRLQ9UBU3 117 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 A0A1B0GTI1 187 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 A0A1B0GVT2 93 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 CDC14CA4D256 554 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 TLCD2A6NGC4 264 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 DCTN6O00399 190 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 GMFGO60234 142 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 UTS2O95399 124 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 CD79AP11912 226 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 CSF2RBP32927 897 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 NANOS3P60323 173 aaKnown RBP11.01□□□□□ -0.65
SHMT2-207ENST00000553837 CXADRP78310 365 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 CFHR1Q03591 330 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 ZNF74Q16587 644 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 STAC2Q6ZMT1 411 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 SLC35F3Q8IY50 421 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 EXD3Q8N9H8 876 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 INO80EQ8NBZ0 244 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-207ENST00000553837 OR5M8Q8NGP6 311 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 DNAJA3Q96EY1 480 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 HSPA12BQ96MM6 686 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 EDEM2Q9BV94 578 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 OR8D2Q9GZM6 311 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 PPP4R1LQ9P1A2 415 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 PRODH2Q9UF12 536 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 KLHDC2Q9Y2U9 406 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 ASXL3Q9C0F0 2248 aa11.01□□□□□ -0.65
SHMT2-207ENST00000553837 SEC16AO15027 2179 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 C9orf170A2RU37 121 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 RNF222A6NCQ9 220 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 ELOA3DA6NLF2 546 aaPredicted RBP11□□□□□ -0.65
SHMT2-207ENST00000553837 OR6C76A6NM76 312 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 COLCA2A8K830 154 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 H0YIG0 161 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 FADS1O60427 444 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 IL33O95760 270 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 DDAH2O95865 285 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 ACTL6AO96019 429 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 TMIGD3P0DMS9 266 aaPredicted RBP11□□□□□ -0.65
SHMT2-207ENST00000553837 SRFP11831 508 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 MYF5P13349 255 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms