RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 ZCCHC18P0CG32 403 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 CD28P10747 220 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 RAC2P15153 192 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 KRTAP10-11P60412 298 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 VMO1Q7Z5L0 202 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 IGFN1Q86VF2 1251 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 OR8G5Q8NG78 346 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 ASB10Q8WXI3 467 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 VPS33AQ96AX1 596 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 APOPT1Q96IL0 206 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 COG8Q96MW5 612 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 SLCO1B3Q9NPD5 702 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 ZNF229Q9UJW7 825 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 DYNC2H1Q8NCM8 4307 aaKnown RBP11.33□□□□□ -0.6
PRPF39-204ENST00000553605 A0A1B0GVI7 797 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 F5H5P2 479 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 PAHP00439 452 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 OPN1SWP03999 348 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 F13BP05160 661 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 FAM153BP0C7A2 387 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 ASAH2BP0C7U1 165 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 UMPSP11172 480 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 UGT2B15P54855 530 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 FMODQ06828 376 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 KCNJ8Q15842 424 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 GTDC1Q4AE62 458 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 CDONQ4KMG0 1287 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 KLHL22Q53GT1 634 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 HHATQ5VTY9 493 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 HDDC2Q7Z4H3 204 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 RANBP3LQ86VV4 465 aaPredicted RBP11.32□□□□□ -0.6
PRPF39-204ENST00000553605 ZNF781Q8N8C0 355 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 NMD3Q96D46 503 aaKnown RBP11.32□□□□□ -0.6
PRPF39-204ENST00000553605 CLPTM1LQ96KA5 538 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 ZNF582Q96NG8 517 aaPredicted RBP11.32□□□□□ -0.6
PRPF39-204ENST00000553605 ZBTB18Q99592 522 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 WFDC6Q9BQY6 131 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 SPATA5L1Q9BVQ7 753 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 TXLNGYQ9BZA5 131 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 CNTD2Q9H8S5 307 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 SMURF1Q9HCE7 757 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 KPTNQ9Y664 436 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 U3KQK5 164 aa11.32□□□□□ -0.6
PRPF39-204ENST00000553605 ELOVL7A1L3X0 281 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 ADARB2-AS1A8MUL3 147 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 MLNRO43193 412 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 ADAM20O43506 726 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 ITM2AO43736 263 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 OR10H3O60404 316 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 ALDOCP09972 364 aaKnown RBP11.31□□□□□ -0.6
PRPF39-204ENST00000553605 COX5BP10606 129 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 EEF1B2P24534 225 aaKnown RBP11.31□□□□□ -0.6
PRPF39-204ENST00000553605 GUCA1AP43080 201 aaPredicted RBP11.31□□□□□ -0.6
PRPF39-204ENST00000553605 DAP3P51398 398 aaKnown RBP11.31□□□□□ -0.6
PRPF39-204ENST00000553605 CD47Q08722 323 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 RGNQ15493 299 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 OR2T2Q6IF00 324 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 TTC33Q6PID6 262 aaPredicted RBP11.31□□□□□ -0.6
PRPF39-204ENST00000553605 SLC25A47Q6Q0C1 308 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 METAP1DQ6UB28 335 aaPredicted RBP11.31□□□□□ -0.6
PRPF39-204ENST00000553605 BTN2A1Q7KYR7 527 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 NANOGNBQ7Z5D8 188 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 OR11L1Q8NGX0 322 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 PCDHAC1Q9H158 963 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 RANBP3Q9H6Z4 567 aaPredicted RBP11.31□□□□□ -0.6
PRPF39-204ENST00000553605 AIG1Q9NVV5 245 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 STX18Q9P2W9 335 aaKnown RBP11.31□□□□□ -0.6
PRPF39-204ENST00000553605 SLC13A4Q9UKG4 626 aa11.31□□□□□ -0.6
PRPF39-204ENST00000553605 A0A1W2PRD5 423 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 A0A1W2PRF3 423 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 A0A1W2PRM7 423 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 E9PQ18 207 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 H3BUX3 64 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 KPNA4O00629 521 aaPredicted RBP11.3□□□□□ -0.6
PRPF39-204ENST00000553605 NPFFO15130 113 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 CHP2O43745 196 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 ECDO95905 644 aaPredicted RBP11.3□□□□□ -0.6
PRPF39-204ENST00000553605 IL6P05231 212 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 NHLRC4P0CG21 123 aaPredicted RBP11.3□□□□□ -0.6
PRPF39-204ENST00000553605 BMP2P12643 396 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 GATA4P43694 442 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 HOXA4Q00056 320 aaPredicted RBP11.3□□□□□ -0.6
PRPF39-204ENST00000553605 GUCA2AQ02747 115 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 ARMC4Q5T2S8 1044 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 NXNQ6DKJ4 435 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 SFRP4Q6FHJ7 346 aaPredicted RBP11.3□□□□□ -0.6
PRPF39-204ENST00000553605 C1orf94Q6P1W5 598 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 ZNF613Q6PF04 617 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 SYT9Q86SS6 491 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 KRT73Q86Y46 540 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 DTX3Q8N9I9 347 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 Q8TCH9 128 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 TCP10LQ8TDR4 215 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 EPS8L3Q8TE67 593 aaKnown RBP11.3□□□□□ -0.6
PRPF39-204ENST00000553605 HDAC2Q92769 488 aaKnown RBP11.3□□□□□ -0.6
PRPF39-204ENST00000553605 ERGIC1Q969X5 290 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 CITED2Q99967 270 aaPredicted RBP11.3□□□□□ -0.6
PRPF39-204ENST00000553605 PPCSQ9HAB8 311 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 MAB21L2Q9Y586 359 aa11.3□□□□□ -0.6
PRPF39-204ENST00000553605 SACSQ9NZJ4 4579 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms