RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 IL13RA1P78552 427 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 CCL8P80075 99 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 HSF2Q03933 536 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 ALKBH6Q3KRA9 238 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 GPR139Q6DWJ6 353 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 ZER1Q7Z7L7 766 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 DHFR2Q86XF0 187 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 SIGLECL1Q8N7X8 197 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 OR52J3Q8NH60 311 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 AKR7LQ8NHP1 331 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 SYNPRQ8TBG9 265 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 RAB1CQ92928 201 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 DVL3Q92997 716 aaPredicted RBP10.02□□□□□ -0.81
SRP54-203ENST00000553544 ASB9Q96DX5 294 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 RSRC1Q96IZ7 334 aaKnown RBP10.02□□□□□ -0.81
SRP54-203ENST00000553544 ZNF570Q96NI8 536 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 WACQ9BTA9 647 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 OR2H1Q9GZK4 316 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 SLITRK2Q9H156 845 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 WNT5BQ9H1J7 359 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 IL1RAPQ9NPH3 570 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 POLE4Q9NR33 117 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 DECR2Q9NUI1 292 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 VSX1Q9NZR4 365 aaPredicted RBP10.02□□□□□ -0.81
SRP54-203ENST00000553544 TAAR3PQ9P1P4 343 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 OPN4Q9UHM6 478 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 TIMM10BQ9Y5J6 103 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 IGHV1-69-2A0A0G2JMI3 117 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 TEX13CA0A0J9YWL9 993 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 XKRYO14609 159 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 TPD52L2O43399 206 aaKnown RBP10.01□□□□□ -0.81
SRP54-203ENST00000553544 IGHV3-13P01766 116 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 IGHV2-5P01817 119 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 FABP3P05413 133 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 LCKP06239 509 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 CTLA4P16410 223 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 MSR1P21757 451 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 ZFP36P26651 326 aaKnown RBP10.01□□□□□ -0.81
SRP54-203ENST00000553544 IFNGR2P38484 337 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 GUCA1AP43080 201 aaPredicted RBP10.01□□□□□ -0.81
SRP54-203ENST00000553544 KLF3P57682 345 aaPredicted RBP10.01□□□□□ -0.81
SRP54-203ENST00000553544 PCBD1P61457 104 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 KRR1Q13601 381 aaKnown RBP10.01□□□□□ -0.81
SRP54-203ENST00000553544 TRIM25Q14258 630 aaKnown RBP10.01□□□□□ -0.81
SRP54-203ENST00000553544 OCLNQ16625 522 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 MOGQ16653 247 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 HFEQ30201 348 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 LCN8Q6JVE9 175 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 DPY19L2P2Q6ZN68 376 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 PTCHD4Q6ZW05 846 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 DOK3Q7L591 496 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 ALDH16A1Q8IZ83 802 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 ZNF101Q8IZC7 436 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 OR1J1Q8NGS3 322 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 C11orf40Q8WZ69 217 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 RASD2Q96D21 266 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 MARS2Q96GW9 593 aaKnown RBP10.01□□□□□ -0.81
SRP54-203ENST00000553544 TIMD4Q96H15 378 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 OR51B6Q9H340 312 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 MAGIXQ9H6Y5 334 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 SLCO1C1Q9NYB5 712 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 NKIRAS2Q9NYR9 191 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 IL20RAQ9UHF4 553 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 IER3IP1Q9Y5U9 82 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 V9GYQ6 96 aa10.01□□□□□ -0.81
SRP54-203ENST00000553544 A0A1W2PPL8 197 aa10□□□□□ -0.81
SRP54-203ENST00000553544 C5orf49A4QMS7 147 aa10□□□□□ -0.81
SRP54-203ENST00000553544 UNC119BA6NIH7 251 aa10□□□□□ -0.81
SRP54-203ENST00000553544 C12orf71A8MTZ7 269 aa10□□□□□ -0.81
SRP54-203ENST00000553544 CLDN25C9JDP6 229 aa10□□□□□ -0.81
SRP54-203ENST00000553544 IMPA2O14732 288 aa10□□□□□ -0.81
SRP54-203ENST00000553544 UBOX5O94941 541 aa10□□□□□ -0.81
SRP54-203ENST00000553544 GADD45GO95257 159 aa10□□□□□ -0.81
SRP54-203ENST00000553544 FSHBP01225 129 aa10□□□□□ -0.81
SRP54-203ENST00000553544 COX5BP10606 129 aa10□□□□□ -0.81
SRP54-203ENST00000553544 CCNOP22674 350 aa10□□□□□ -0.81
SRP54-203ENST00000553544 CDKN2AP42771 156 aaKnown RBP10□□□□□ -0.81
SRP54-203ENST00000553544 GDI2P50395 445 aaKnown RBP10□□□□□ -0.81
SRP54-203ENST00000553544 HMGA2P52926 109 aa10□□□□□ -0.81
SRP54-203ENST00000553544 TRAP1Q12931 704 aaKnown RBP10□□□□□ -0.81
SRP54-203ENST00000553544 BAMBIQ13145 260 aa10□□□□□ -0.81
SRP54-203ENST00000553544 GK3PQ14409 553 aa10□□□□□ -0.81
SRP54-203ENST00000553544 RFX4Q33E94 735 aa10□□□□□ -0.81
SRP54-203ENST00000553544 FAM98BQ52LJ0 330 aaKnown RBP10□□□□□ -0.81
SRP54-203ENST00000553544 TMEM255AQ5JRV8 349 aa10□□□□□ -0.81
SRP54-203ENST00000553544 ZNF774Q6NX45 483 aa10□□□□□ -0.81
SRP54-203ENST00000553544 SMARCD3Q6STE5 483 aa10□□□□□ -0.81
SRP54-203ENST00000553544 C1orf174Q8IYL3 243 aa10□□□□□ -0.81
SRP54-203ENST00000553544 LINC00471Q8N535 108 aa10□□□□□ -0.81
SRP54-203ENST00000553544 SNX33Q8WV41 574 aa10□□□□□ -0.81
SRP54-203ENST00000553544 SLC25A28Q96A46 364 aa10□□□□□ -0.81
SRP54-203ENST00000553544 DUX5Q96PT3 197 aa10□□□□□ -0.81
SRP54-203ENST00000553544 BTBD10Q9BSF8 475 aa10□□□□□ -0.81
SRP54-203ENST00000553544 C1QTNF5Q9BXJ0 243 aa10□□□□□ -0.81
SRP54-203ENST00000553544 MMADHCQ9H3L0 296 aaPredicted RBP10□□□□□ -0.81
SRP54-203ENST00000553544 YY1AP1Q9H869 796 aa10□□□□□ -0.81
SRP54-203ENST00000553544 EMC7Q9NPA0 242 aa10□□□□□ -0.81
SRP54-203ENST00000553544 TAS2R1Q9NYW7 299 aa10□□□□□ -0.81
SRP54-203ENST00000553544 NUP50Q9UKX7 468 aa10□□□□□ -0.81
SRP54-203ENST00000553544 AURKCQ9UQB9 309 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms