RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 ATPIF1Q9UII2 106 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 HSPE1-MOB4S4R3N1 261 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 AKAP6Q13023 2319 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 ATP6V1G2-DDX39BF2Z307 99 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 ABCD4O14678 606 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 SPARCP09486 303 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 SBK2P0C263 348 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 ZNF823P16415 610 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 ALOX5APP20292 161 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 ANOS1P23352 680 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 OTX1P32242 354 aaPredicted RBP12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 WNT5AP41221 380 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 SLC15A1P46059 708 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 HCCSP53701 268 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 KRTAP10-9P60411 292 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 RPS7P62081 194 aaKnown RBP12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 NKX6-1P78426 367 aaPredicted RBP12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 LCN1P1Q5VSP4 162 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 ADAM5Q6NVV9 412 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 SLC16A9Q7RTY1 509 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 SLC30A7Q8NEW0 376 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 KBTBD8Q8NFY9 601 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 OR10H5Q8NGA6 315 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 OR1F12Q8NHA8 337 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 CNIH3Q8TBE1 160 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 RNF133Q8WVZ7 376 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 SLC7A6Q92536 515 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 NEUROG1Q92886 237 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 ANKRD60Q9BZ19 345 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 KCNN2Q9H2S1 579 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 PLEKHF2Q9H8W4 249 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 RNF121Q9H920 327 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 MRPS18AQ9NVS2 196 aaKnown RBP12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 COPS3Q9UNS2 423 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 RNF115Q9Y4L5 304 aa12.84□□□□□ -0.35
MTHFD1-204ENST00000553405 DOK2O60496 412 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 CD3EP07766 207 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 ADRA2AP08913 450 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 MRPL3P09001 348 aaKnown RBP12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 CCL2P13500 99 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 STOMP27105 288 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 TLE4Q04727 773 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 ZNF91Q05481 1191 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 CDK5R2Q13319 367 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 ELFN2Q5R3F8 820 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 ZNF704Q6ZNC4 412 aaPredicted RBP12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 DCXRQ7Z4W1 244 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 ZNF454Q8N9F8 522 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 IL17RDQ8NFM7 739 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 OR6N2Q8NGY6 317 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 RFKQ969G6 155 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 CNN2Q99439 309 aaKnown RBP12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 COQ7Q99807 217 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 ABHD6Q9BV23 337 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 YIPF3Q9GZM5 350 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 HDHD2Q9H0R4 259 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 C1orf198Q9H425 327 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 PLEK2Q9NYT0 353 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 EXOGQ9Y2C4 368 aaKnown RBP12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 POLR1DQ9Y2S0 133 aa12.83□□□□□ -0.36
MTHFD1-204ENST00000553405 APOL3O95236 402 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 DBHP09172 617 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 DBTP11182 482 aaKnown RBP12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 MYF6P23409 242 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 SSTR2P30874 369 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 OPRL1P41146 370 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 MTNR1AP48039 350 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 NUDT6P53370 316 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 IL5RAQ01344 420 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 MSMPQ1L6U9 139 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 ZNF684Q5T5D7 378 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 RHOUQ7L0Q8 258 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 SHFQ7M4L6 423 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 THAP5Q7Z6K1 395 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 ZNF101Q8IZC7 436 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 C8orf59Q8N0T1 100 aaPredicted RBP12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 SETD9Q8NE22 299 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 OR4F15Q8NGB8 312 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 OR51G2Q8NGK0 314 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 IGFBPL1Q8WX77 278 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 LGALS12Q96DT0 336 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 SLAMF6Q96DU3 332 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 ZNF184Q99676 751 aaPredicted RBP12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 ZNF649Q9BS31 505 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 RHNO1Q9BSD3 238 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 RASSF4Q9H2L5 321 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 AMBNQ9NP70 447 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 H2AFY2Q9P0M6 372 aaPredicted RBP12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 PCDHGB5Q9Y5G0 923 aa12.82□□□□□ -0.36
MTHFD1-204ENST00000553405 VPS13CQ709C8 3753 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 IQCMA0A1B0GVH7 501 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 E7EQL1 145 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 NR4A1P22736 598 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 PCSK6P29122 969 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 HTR5AP47898 357 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 HSPA13P48723 471 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 ROM1Q03395 351 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 PLP2Q04941 152 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 EIF2B1Q14232 305 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms