RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 CXADRP78310 365 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 TFF2Q03403 129 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 FABP9Q0Z7S8 132 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 MEP1BQ16820 701 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 MESTQ5EB52 335 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 C9orf152Q5JTZ5 239 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 PRAMEF17Q5VTA0 474 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 FAM166AQ6J272 317 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 UQCC3Q6UW78 93 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 C5orf46Q6UWT4 87 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 CDC20BQ86Y33 519 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 ZNF595Q8IYB9 648 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SPAG16Q8N0X2 631 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 OR52R1Q8NGF1 315 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 OR6S1Q8NH40 331 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 OR51F2Q8NH61 342 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SLC25A43Q8WUT9 341 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 NUDCD2Q8WVJ2 157 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 PHYHIPQ92561 330 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 HIST1H2BAQ96A08 127 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SLC25A36Q96CQ1 311 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SLC41A2Q96JW4 573 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SPACA7Q96KW9 195 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 ZFYVE21Q9BQ24 234 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 HDAC8Q9BY41 377 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 OR8D2Q9GZM6 311 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 PITHD1Q9GZP4 211 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SYT4Q9H2B2 425 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SLC5A6Q9Y289 635 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 LOC100289279A0A1B0GTE1 492 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 A0A1B0GTQ1 180 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 CDC14CA4D256 554 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 A6NLC8 198 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 ZNF736B4DX44 427 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 TGFBR3LH3BV60 316 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 LINC01565O15544 149 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 CLN5O75503 358 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 CSTAP01040 98 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SERPINA5P05154 406 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 OR8U8P0C7N1 319 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 ALOX5APP20292 161 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 ABCD3P28288 659 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SERPINF1P36955 418 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 PRKXP51817 358 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SRSF4Q08170 494 aaKnown RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SPOCK1Q08629 439 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 ENPP2Q13822 863 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 PEA15Q15121 130 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 EIF2S3LQ2VIR3 472 aaKnown RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 DMRTC1Q5HYR2 192 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 C1QL3Q5VWW1 255 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 CDCP2Q5VXM1 449 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 DHRS11Q6UWP2 260 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 DPY19L2P2Q6ZN68 376 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 ZNF704Q6ZNC4 412 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SAMD14Q8IZD0 417 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SEMA6DQ8NFY4 1073 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 TSEN15Q8WW01 171 aaKnown RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 DCUN1D4Q92564 292 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 FAM46BQ96A09 425 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 GAL3ST3Q96A11 431 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 MMABQ96EY8 250 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 PHYHIPLQ96FC7 376 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 AKR1E2Q96JD6 320 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 CNTNAP3BQ96NU0 1288 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 OR2A5Q96R48 311 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 WDR77Q9BQA1 342 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 CFHR5Q9BXR6 569 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SEBOXQ9HB31 216 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 RHOFQ9HBH0 211 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 DUSP22Q9NRW4 184 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 PNO1Q9NRX1 252 aaKnown RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 TAS2R8Q9NYW2 309 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 TAS2R4Q9NYW5 299 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 PILRAQ9UKJ1 303 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 CYP8B1Q9UNU6 501 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 DMDP11532 3685 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 TCRBV21S2A2A0A5A6 115 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 MED19A0JLT2 244 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 FAM157AC9JC47 383 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 C11orf98E9PRG8 122 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 F8VVB4 439 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 F8VWA3 439 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 EFSO43281 561 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SSX5O60225 188 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SNAPINO95295 136 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 MPZL1O95297 269 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 NQO2P16083 231 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 CD80P33681 288 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 NR0B1P51843 470 aaKnown RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 TAS2R19P59542 299 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 PPP1CAP62136 330 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 RPS4XP62701 263 aaKnown RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 IL13RA1P78552 427 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 EGR4Q05215 589 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 PMPCAQ10713 525 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 GAB4Q2WGN9 574 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 CDNFQ49AH0 187 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 CCDC157Q569K6 752 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 C9orf50Q5SZB4 431 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms