RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 KDELR2P33947 212 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 SLC9A3P48764 834 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 CTXN1P60606 82 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 UBA52P62987 128 aaKnown RBP6.43□□□□□ -1.38
NEK3-201ENST00000550331 SELENOWP63302 87 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 TNFAIP6P98066 277 aaPredicted RBP6.43□□□□□ -1.38
NEK3-201ENST00000550331 SCRN3Q0VDG4 424 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 PSG7Q13046 419 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 CDK5R2Q13319 367 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 ENDOGQ14249 297 aaKnown RBP6.43□□□□□ -1.38
NEK3-201ENST00000550331 MAPRE2Q15555 327 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 TMEM155Q4W5P6 130 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 MIDNQ504T8 468 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 CYBRD1Q53TN4 286 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 RBMS3Q6XE24 437 aaKnown RBP6.43□□□□□ -1.38
NEK3-201ENST00000550331 OFCC1Q8IZS5 231 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 KLHL36Q8N4N3 616 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 ZNF283Q8N7M2 679 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 CLDN22Q8N7P3 220 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 PCYOX1LQ8NBM8 494 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 FAM156AQ8NDB6 213 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 DEFB108BQ8NET1 73 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 C10orf82Q8WW14 230 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 DVL3Q92997 716 aaPredicted RBP6.43□□□□□ -1.38
NEK3-201ENST00000550331 POP5Q969H6 163 aaKnown RBP6.43□□□□□ -1.38
NEK3-201ENST00000550331 C4orf45Q96LM5 186 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 ZNF583Q96ND8 569 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 MSL2Q9HCI7 577 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 ESM1Q9NQ30 184 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 MAN2C1Q9NTJ4 1040 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 TMEM106BQ9NUM4 274 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 UBAP1Q9NZ09 502 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 PURGQ9UJV8 347 aaKnown RBP6.43□□□□□ -1.38
NEK3-201ENST00000550331 A4GNTQ9UNA3 340 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 PCDHGB1Q9Y5G3 927 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 WNK2Q9Y3S1 2297 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 TRAV27A0A087WT01 109 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 A8MXK9 166 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 EFCAB9A8MZ26 197 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 J3QW42 95 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 AHCYL1O43865 530 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 TIMM8AO60220 97 aaPredicted RBP6.42□□□□□ -1.38
NEK3-201ENST00000550331 IFNW1P05000 195 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 SBK2P0C263 348 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 HKR1P10072 659 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 ZNF12P17014 697 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 KITLGP21583 273 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 CPT2P23786 658 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 ZFP36P26651 326 aaKnown RBP6.42□□□□□ -1.38
NEK3-201ENST00000550331 SLC6A9P48067 706 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 BTG1P62324 171 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 PRKCDQ05655 676 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 FOXL1Q12952 345 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 ZNF154Q13106 437 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 KLF10Q13118 480 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 FHL1Q13642 323 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 TRAM2Q15035 370 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 LRRC23Q53EV4 343 aaPredicted RBP6.42□□□□□ -1.38
NEK3-201ENST00000550331 ARMCX4Q5H9R4 360 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 ZNF774Q6NX45 483 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 ZNF771Q7L3S4 317 aaPredicted RBP6.42□□□□□ -1.38
NEK3-201ENST00000550331 DOK3Q7L591 496 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 OAFQ86UD1 273 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 IGFN1Q86VF2 1251 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 LRRC28Q86X40 367 aaPredicted RBP6.42□□□□□ -1.38
NEK3-201ENST00000550331 NRMQ8IXM6 262 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 RNF113BQ8IZP6 322 aaKnown RBP6.42□□□□□ -1.38
NEK3-201ENST00000550331 OR2T12Q8NG77 320 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 OR51A7Q8NH64 312 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 C22orf15Q8WYQ4 148 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 LZICQ8WZA0 190 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 FAM46AQ96IP4 442 aaKnown RBP6.42□□□□□ -1.38
NEK3-201ENST00000550331 TPD52L3Q96J77 140 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 SAMD8Q96LT4 415 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 COG8Q96MW5 612 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 SIGLEC11Q96RL6 698 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 GPA33Q99795 319 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 ZNF747Q9BV97 191 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 TMEM120AQ9BXJ8 343 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 NDEL1Q9GZM8 345 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 PATZ1Q9HBE1 687 aaKnown RBP6.42□□□□□ -1.38
NEK3-201ENST00000550331 POLE4Q9NR33 117 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 GID8Q9NWU2 228 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 PLEK2Q9NYT0 353 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 IL19Q9UHD0 177 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 NUP50Q9UKX7 468 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 AP3M1Q9Y2T2 418 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 AUP1Q9Y679 476 aa6.42□□□□□ -1.38
NEK3-201ENST00000550331 VWFP04275 2813 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 TEX13CA0A0J9YWL9 993 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 ELOVL7A1L3X0 281 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 F5H0A9 414 aaPredicted RBP6.41□□□□□ -1.38
NEK3-201ENST00000550331 IFNL4K9M1U5 179 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 XKRYO14609 159 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 SURF4O15260 269 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 DOK2O60496 412 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 TROVE2P10155 538 aaKnown RBP eCLIP6.41□□□□□ -1.38
NEK3-201ENST00000550331 PRTN3P24158 256 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 MDH2P40926 338 aaKnown RBP6.41□□□□□ -1.38
NEK3-201ENST00000550331 HTR5AP47898 357 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms