RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 ERMAPQ96PL5 475 aaPredicted RBP13.86□□□□□ -0.19
VPS29-207ENST00000549970 CDRT15Q96T59 188 aa13.86□□□□□ -0.19
VPS29-207ENST00000549970 ARL8BQ9NVJ2 186 aa13.86□□□□□ -0.19
VPS29-207ENST00000549970 TBCCD1Q9NVR7 557 aa13.86□□□□□ -0.19
VPS29-207ENST00000549970 TAGLN3Q9UI15 199 aa13.86□□□□□ -0.19
VPS29-207ENST00000549970 KLHL21Q9UJP4 597 aa13.86□□□□□ -0.19
VPS29-207ENST00000549970 ZDHHC8Q9ULC8 765 aa13.86□□□□□ -0.19
VPS29-207ENST00000549970 TRAV20A0A0B4J274 112 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 ISPDA4D126 451 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 ARPC2O15144 300 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 TCF21O43680 179 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 OR10H3O60404 316 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 UBOX5O94941 541 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 TXNDC12O95881 172 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 ADH4P08319 380 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 SMIM11AP58511 58 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 LSM6P62312 80 aaKnown RBP13.85□□□□□ -0.19
VPS29-207ENST00000549970 TNFAIP6P98066 277 aaPredicted RBP13.85□□□□□ -0.19
VPS29-207ENST00000549970 HNRNPA0Q13151 305 aaKnown RBP13.85□□□□□ -0.19
VPS29-207ENST00000549970 CCDC92Q53HC0 331 aaPredicted RBP13.85□□□□□ -0.19
VPS29-207ENST00000549970 ACSM5Q6NUN0 579 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 FAHD2BQ6P2I3 314 aaPredicted RBP13.85□□□□□ -0.19
VPS29-207ENST00000549970 SHQ1Q6PI26 577 aaKnown RBP13.85□□□□□ -0.19
VPS29-207ENST00000549970 ZER1Q7Z7L7 766 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 RFLNBQ8N5W9 214 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 OR1F12Q8NHA8 337 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 FAHD2AQ96GK7 314 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 OR52D1Q9H346 318 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 METTL17Q9H7H0 456 aaPredicted RBP13.85□□□□□ -0.19
VPS29-207ENST00000549970 CD300AQ9UGN4 299 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 METRNQ9UJH8 293 aa13.85□□□□□ -0.19
VPS29-207ENST00000549970 PURGQ9UJV8 347 aaKnown RBP13.85□□□□□ -0.19
VPS29-207ENST00000549970 TANC2Q9HCD6 1990 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 OR6C6A6NF89 314 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 DCTN6O00399 190 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 RER1O15258 196 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 DEAF1O75398 565 aaPredicted RBP13.84□□□□□ -0.19
VPS29-207ENST00000549970 IGHV2-5P01817 119 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 FABP3P05413 133 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 DBHP09172 617 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 ANPEPP15144 967 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 RRM2P31350 389 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 MXRA7P84157 204 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 DBPQ10586 325 aaPredicted RBP13.84□□□□□ -0.19
VPS29-207ENST00000549970 MEP1BQ16820 701 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 RFX4Q33E94 735 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 LEG1Q6P5S2 330 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 DNM1P34Q6PK57 102 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 JAZF1Q86VZ6 243 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 DEFB107AQ8IZN7 70 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 CMBLQ96DG6 245 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 DIRC2Q96SL1 478 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 GAL3ST1Q99999 423 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 OCEL1Q9H607 264 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 UBAP1Q9NZ09 502 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 ARL2BPQ9Y2Y0 163 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 STARD10Q9Y365 291 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 FBN3Q75N90 2809 aa13.84□□□□□ -0.19
VPS29-207ENST00000549970 WNK2Q9Y3S1 2297 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 PLPP2O43688 288 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 PNPP00491 289 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 CD55P08174 381 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 TUBG1P23258 451 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 FPR3P25089 353 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 CRABP1P29762 137 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 SLC6A6P31641 620 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 RBMXP38159 391 aaKnown RBP13.83□□□□□ -0.2
VPS29-207ENST00000549970 ERFP50548 548 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 SLC3A1Q07837 685 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 C16orf89Q6UX73 402 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 PEG10Q86TG7 708 aaKnown RBP13.83□□□□□ -0.2
VPS29-207ENST00000549970 OR2Z1Q8NG97 314 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 OR4K13Q8NH42 304 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 SAMD8Q96LT4 415 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 NMNAT3Q96T66 252 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 IFT27Q9BW83 186 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 SRA1Q9HD15 236 aaKnown RBP13.83□□□□□ -0.2
VPS29-207ENST00000549970 TUBG2Q9NRH3 451 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 DCAF16Q9NXF7 216 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 TMCC3Q9ULS5 477 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 B9D1Q9UPM9 204 aa13.83□□□□□ -0.2
VPS29-207ENST00000549970 IGLV1-36A0A0B4J1U3 117 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 DCTN3O75935 186 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 RENP00797 406 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 HIST1H1CP16403 213 aaKnown RBP13.82□□□□□ -0.2
VPS29-207ENST00000549970 KITLGP21583 273 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 TNFSF4P23510 183 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 NOS3P29474 1203 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 IFNGR2P38484 337 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 CDK5R2Q13319 367 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 KCNMB1Q16558 191 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 CORO6Q6QEF8 472 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 Q6ZR03 302 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 PIGWQ7Z7B1 504 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 ZDHHC21Q8IVQ6 265 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 OR5AS1Q8N127 324 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 OR6V1Q8N148 313 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 GJC3Q8NFK1 279 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 COG8Q96MW5 612 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 DCLRE1CQ96SD1 692 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms