RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 SELENOWP63302 87 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 SCRN3Q0VDG4 424 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 BNIP1Q12981 228 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 FHL1Q13642 323 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 ZMYND11Q15326 602 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 KLF17Q5JT82 389 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-218ENST00000548945 OAFQ86UD1 273 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 RNF113BQ8IZP6 322 aaKnown RBP10.82□□□□□ -0.68
PTCH1-218ENST00000548945 OFCC1Q8IZS5 231 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 MUC20Q8N307 709 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-218ENST00000548945 CLDN22Q8N7P3 220 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 OR2Z1Q8NG97 314 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 HAVCR1Q96D42 359 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 SIGLEC11Q96RL6 698 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 DCLRE1CQ96SD1 692 aaKnown RBP10.82□□□□□ -0.68
PTCH1-218ENST00000548945 DCAF16Q9NXF7 216 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 ZNF69Q9UC07 566 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 IL20RAQ9UHF4 553 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 PPP1R3CQ9UQK1 317 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 LRCH1Q9Y2L9 728 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 POM121CA8CG34 1229 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 FAM220BPB1ANY3 271 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 SGCEO43556 437 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 DOK2O60496 412 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 FSTL3O95633 263 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 RNASE1P07998 156 aaKnown RBP10.81□□□□□ -0.68
PTCH1-218ENST00000548945 CALB2P22676 271 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 PRDX6P30041 224 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 HTR5AP47898 357 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 IL13RA1P78552 427 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 PRKCDQ05655 676 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 PAX8Q06710 450 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 KLF10Q13118 480 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 LRRC23Q53EV4 343 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-218ENST00000548945 ESCO2Q56NI9 601 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 SLC27A4Q6P1M0 643 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 Q6ZR03 302 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 C9orf139Q6ZV77 190 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 IGFN1Q86VF2 1251 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 NRMQ8IXM6 262 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 OR51A7Q8NH64 312 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 LZICQ8WZA0 190 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 PTP4A1Q93096 173 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 SLC25A28Q96A46 364 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 CMTM5Q96DZ9 223 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 C1orf147Q96MC9 270 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-218ENST00000548945 OR5V1Q9UGF6 321 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 TAGLN3Q9UI15 199 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 ATPIF1Q9UII2 106 aa10.81□□□□□ -0.68
PTCH1-218ENST00000548945 CMYA5Q8N3K9 4069 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 TRAV27A0A087WT01 109 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 EFCAB9A8MZ26 197 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 TMEM178BH3BS89 294 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 XKRYO14609 159 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 MRASO14807 208 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 KCNAB3O43448 404 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 IFNW1P05000 195 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 SCG5P05408 212 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 CD14P08571 375 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 RAC2P15153 192 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 MTNR1AP48039 350 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 RGS6P49758 472 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 RASSF2P50749 326 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 SEC61A1P61619 476 aaKnown RBP10.8□□□□□ -0.68
PTCH1-218ENST00000548945 BAMBIQ13145 260 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 AQP6Q13520 282 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 TRAM2Q15035 370 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 MAPRE2Q15555 327 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 VASH1Q7L8A9 365 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-218ENST00000548945 PCYOX1LQ8NBM8 494 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 OR2T12Q8NG77 320 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 ITLN1Q8WWA0 313 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 ACOT11Q8WXI4 607 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-218ENST00000548945 CMBLQ96DG6 245 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 NSL1Q96IY1 281 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 TPD52L3Q96J77 140 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 OR2V2Q96R30 315 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 FNDC11Q9BVV2 318 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 NDEL1Q9GZM8 345 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 POFUT1Q9H488 388 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 GCM1Q9NP62 436 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 EMC7Q9NPA0 242 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 ARL8BQ9NVJ2 186 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 GID8Q9NWU2 228 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 GRHPRQ9UBQ7 328 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 AP3M1Q9Y2T2 418 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 STARD10Q9Y365 291 aa10.8□□□□□ -0.68
PTCH1-218ENST00000548945 TEX13CA0A0J9YWL9 993 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 ELOVL7A1L3X0 281 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 PRSS37A4D1T9 235 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 OR6C6A6NF89 314 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 CEACAM18A8MTB9 384 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 WNT2P09544 360 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 MMP16P51512 607 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 MNAT1P51948 309 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 LSM6P62312 80 aaKnown RBP10.79□□□□□ -0.68
PTCH1-218ENST00000548945 PAX2Q02962 417 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 LRRN1Q6UXK5 716 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 FBXW12Q6X9E4 464 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 TMPRSS11FQ6ZWK6 438 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms