RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 GDF2Q9UK05 429 aaPredicted RBP12.48□□□□□ -0.41
DDX54-203ENST00000546869 POLR1DQ9Y2S0 133 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 CMAHPQ9Y471 501 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 COMMD3-BMI1R4GMX3 469 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 MAST4O15021 2626 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 TEX15Q9BXT5 2789 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 ANKRD17O75179 2603 aaKnown RBP12.47□□□□□ -0.41
DDX54-203ENST00000546869 ZNF593O00488 134 aaPredicted RBP12.47□□□□□ -0.41
DDX54-203ENST00000546869 PRKYO43930 277 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 SMPD2O60906 423 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 CCL2P13500 99 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 ZNF250P15622 560 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 GSTT1P30711 240 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 ELF3P78545 371 aaPredicted RBP12.47□□□□□ -0.41
DDX54-203ENST00000546869 DBPQ10586 325 aaPredicted RBP12.47□□□□□ -0.41
DDX54-203ENST00000546869 SLC25A30Q5SVS4 291 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 AADACL4Q5VUY2 407 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 NXNL2Q5VZ03 156 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 SHFQ7M4L6 423 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 TIGD4Q8IY51 512 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 ZNF511Q8NB15 262 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 OR8J1Q8NGP2 316 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 TMEM163Q8TC26 289 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 MRPL24Q96A35 216 aaKnown RBP12.47□□□□□ -0.41
DDX54-203ENST00000546869 C4orf45Q96LM5 186 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 RDH12Q96NR8 316 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 TEAD3Q99594 435 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 OR51V1Q9H2C8 321 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 PLK3Q9H4B4 646 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 DCLRE1BQ9H816 532 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 MED20Q9H944 212 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 WDR76Q9H967 626 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 PMF1-BGLAPU3KQ54 211 aa12.47□□□□□ -0.41
DDX54-203ENST00000546869 HEATR1Q9H583 2144 aaKnown RBP12.47□□□□□ -0.41
DDX54-203ENST00000546869 TMEM129A0AVI4 362 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 ERICH4A6NGS2 130 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 TVP23AA6NH52 213 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 H3BSA7 217 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 H7C417 338 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 TLX2O43763 284 aaPredicted RBP12.46□□□□□ -0.41
DDX54-203ENST00000546869 WNT5AP41221 380 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 HTR5AP47898 357 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 RGS6P49758 472 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 CDC42P60953 191 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 RCN1Q15293 331 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 RSPO1Q2MKA7 263 aaPredicted RBP12.46□□□□□ -0.41
DDX54-203ENST00000546869 OTPQ5XKR4 325 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 CORO6Q6QEF8 472 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 PRSS57Q6UWY2 283 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 PACRGLQ8N7B6 248 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 OR6K6Q8NGW6 343 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 TRMT61AQ96FX7 289 aaKnown RBP12.46□□□□□ -0.41
DDX54-203ENST00000546869 MAP6Q96JE9 813 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 COG8Q96MW5 612 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 INTS14Q96SY0 518 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 DOK1Q99704 481 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 RIBC2Q9H4K1 309 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 PNRC2Q9NPJ4 139 aaKnown RBP12.46□□□□□ -0.41
DDX54-203ENST00000546869 DDX28Q9NUL7 540 aaKnown RBP12.46□□□□□ -0.41
DDX54-203ENST00000546869 HAO2Q9NYQ3 351 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 AKAP6Q13023 2319 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 PLCE1Q9P212 2302 aa12.46□□□□□ -0.41
DDX54-203ENST00000546869 CSMD1Q96PZ7 3565 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 IGLV3-9A0A075B6K5 115 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 CASQ2O14958 399 aaPredicted RBP12.45□□□□□ -0.42
DDX54-203ENST00000546869 GPRIN2O60269 458 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 CCNOP22674 350 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 ART1P52961 327 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 NUDT6P53370 316 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 RGS7BPQ6MZT1 257 aaPredicted RBP12.45□□□□□ -0.42
DDX54-203ENST00000546869 LYPD4Q6UWN0 246 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 SPNS3Q6ZMD2 512 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 CFAP77Q6ZQR2 320 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 MEPCEQ7L2J0 689 aaKnown RBP12.45□□□□□ -0.42
DDX54-203ENST00000546869 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.45□□□□□ -0.42
DDX54-203ENST00000546869 LINC00346Q8IVM7 164 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 ZNF101Q8IZC7 436 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 TCEANCQ8N8B7 351 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 ZNF454Q8N9F8 522 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 BBS1Q8NFJ9 593 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 ST7LQ8TDW4 575 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 OTULINQ96BN8 352 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 PITX2Q99697 317 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 ATF6BQ99941 703 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 H2AFY2Q9P0M6 372 aaPredicted RBP12.45□□□□□ -0.42
DDX54-203ENST00000546869 CSMD2Q7Z408 3487 aa12.45□□□□□ -0.42
DDX54-203ENST00000546869 DSCAMO60469 2012 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 SLC22A31A6NKX4 558 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 SLC16A6O15403 523 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 LCKP06239 509 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 FAM157BP0CG42 384 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 OTX1P32242 354 aaPredicted RBP12.44□□□□□ -0.42
DDX54-203ENST00000546869 PTH2RP49190 550 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 PPOXP50336 477 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 SELENOVP59797 346 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 SNRPD2P62316 118 aaKnown RBP12.44□□□□□ -0.42
DDX54-203ENST00000546869 TMED1Q13445 227 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 APOFQ13790 326 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 GGTLC2Q14390 218 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 MOGQ16653 247 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms