RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 OR5D18Q8NGL1 313 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 SPACA9Q96E40 222 aaPredicted RBP7.82□□□□□ -1.16
CLIP1-218ENST00000545889 LOXL4Q96JB6 756 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 C7orf34Q96L11 122 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 SAP130Q9H0E3 1048 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 ZNF385DQ9H6B1 395 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 TREM1Q9NP99 234 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 MAN2C1Q9NTJ4 1040 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 KIAA1456Q9P272 454 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 CRYM-AS1A6NIL9 109 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 PLPP1O14494 284 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 FGF17O60258 216 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 HPRP00739 348 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 FTH1P19P0C7X4 201 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 TNFRSF1AP19438 455 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 RGS19P49795 217 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 RIPPLY1Q0D2K3 151 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 COX15Q7KZN9 410 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 SERPINA11Q86U17 422 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 DTWD1Q8N5C7 304 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 ZCCHC14Q8WYQ9 949 aaKnown RBP7.82□□□□□ -1.16
CLIP1-218ENST00000545889 FOXRED1Q96CU9 486 aaPredicted RBP7.82□□□□□ -1.16
CLIP1-218ENST00000545889 YIPF6Q96EC8 236 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 ZNF681Q96N22 645 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 TECTBQ96PL2 329 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 TNFRSF13CQ96RJ3 184 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 DUSP22Q9NRW4 184 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 ZFP57Q9NU63 452 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 MN1Q10571 1320 aaPredicted RBP7.82□□□□□ -1.16
CLIP1-218ENST00000545889 LAMA2P24043 3122 aaKnown RBP7.82□□□□□ -1.16
CLIP1-218ENST00000545889 PPIHO43447 177 aaKnown RBP7.82□□□□□ -1.16
CLIP1-218ENST00000545889 RP2O75695 350 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 SPDEFO95238 335 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 MT-ATP6P00846 226 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 CD14P08571 375 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 TMEM11P17152 192 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 ARR3P36575 388 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 RPS18P62269 152 aaKnown RBP7.82□□□□□ -1.16
CLIP1-218ENST00000545889 ALKBH1Q13686 389 aaKnown RBP7.82□□□□□ -1.16
CLIP1-218ENST00000545889 RAB12Q6IQ22 244 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 SLC22A18ASQ8N1D0 253 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 PTP4A1Q93096 173 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 SDSLQ96GA7 329 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 RTL8AQ9BWD3 113 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 C1QTNF3Q9BXJ4 246 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 TMEM59Q9BXS4 323 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 LHX9Q9NQ69 397 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 TAS2R16Q9NYV7 291 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 LINC00862A6NCI5 91 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 M0R082 166 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 CCL21O00585 134 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 TGM6O95932 706 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 ZP3P21754 424 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 FAM76BQ5HYJ3 339 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 RGS7BPQ6MZT1 257 aaPredicted RBP7.81□□□□□ -1.16
CLIP1-218ENST00000545889 ESPNLQ6ZVH7 1005 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 USP51Q70EK9 711 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 FAM71CQ8NEG0 241 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 OR4D9Q8NGE8 314 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 UPRTQ96BW1 309 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 GNB4Q9HAV0 340 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 ZNF286AQ9HBT8 521 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 AK6Q9Y3D8 172 aaKnown RBP7.81□□□□□ -1.16
CLIP1-218ENST00000545889 ZFHX2Q9C0A1 2572 aaPredicted RBP7.81□□□□□ -1.16
CLIP1-218ENST00000545889 TMEM72A0PK05 275 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 PRKYO43930 277 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 IFNA1P01562 189 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 APOA2P02652 100 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 GABRA1P14867 456 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 TBXA2RP21731 343 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 DRD5P21918 477 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 CDK2P24941 298 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 TEAD1P28347 426 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 S100A2P29034 98 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 CD79BP40259 229 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 PTH2RP49190 550 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 PGGHGQ32M88 737 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 XKR7Q5GH72 579 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 WIPI1Q5MNZ9 446 aaPredicted RBP7.81□□□□□ -1.16
CLIP1-218ENST00000545889 CAMKMTQ7Z624 323 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 ALG12Q9BV10 488 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 GPR87Q9BY21 358 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 NT5DC2Q9H857 520 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 DDX31Q9H8H2 851 aaKnown RBP7.81□□□□□ -1.16
CLIP1-218ENST00000545889 TIMM10BQ9Y5J6 103 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 MTCL1Q9Y4B5 1905 aaKnown RBP7.81□□□□□ -1.16
CLIP1-218ENST00000545889 DOCK9Q9BZ29 2069 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 A6NIN4 97 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 ZNF705EA8MWA4 302 aaPredicted RBP7.81□□□□□ -1.16
CLIP1-218ENST00000545889 NUDT19A8MXV4 375 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 OR8G3PP0DMU2 310 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 RRASP10301 218 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 MEOX1P50221 254 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 TMPRSS3P57727 454 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 FRMPD2BQ6IN97 320 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 TMEM108Q6UXF1 575 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 OR4M1Q8NGD0 313 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 OR2V1Q8NHB1 315 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 BRIX1Q8TDN6 353 aaKnown RBP7.81□□□□□ -1.16
CLIP1-218ENST00000545889 TMEM171Q8WVE6 324 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms