RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 TPT1P8Q9HAU6 139 aa12.66□□□□□ -0.38
CLSTN3-216ENST00000545663 CGGBP1Q9UFW8 167 aaPredicted RBP12.66□□□□□ -0.38
CLSTN3-216ENST00000545663 STARD9Q9P2P6 4700 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 BTBD17A6NE02 478 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 LRRN3E7EW58 273 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 CLIC1O00299 241 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 MRASO14807 208 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 OR2T1O43869 369 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 FARS2O95363 451 aaKnown RBP12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 KIR2DS4P43632 304 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 HSF2Q03933 536 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 PRB3Q04118 309 aaPredicted RBP12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 HACD2Q6Y1H2 254 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 NLRC3Q7RTR2 1065 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 ADPRHL1Q8NDY3 354 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 C19orf18Q8NEA5 215 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 AKR7LQ8NHP1 331 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 SLC41A3Q96GZ6 507 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 CITED2Q99967 270 aaPredicted RBP12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 HOPXQ9BPY8 73 aaPredicted RBP12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 PAIP1Q9H074 479 aaKnown RBP12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 POFUT1Q9H488 388 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 A4GALTQ9NPC4 353 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 CALML5Q9NZT1 146 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 ZNRD1Q9P1U0 126 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 IL19Q9UHD0 177 aa12.65□□□□□ -0.38
CLSTN3-216ENST00000545663 TRAV36DV7A0A075B6V5 113 aa12.64□□□□□ -0.39
CLSTN3-216ENST00000545663 FBXO24O75426 580 aa12.64□□□□□ -0.39
CLSTN3-216ENST00000545663 OPN1SWP03999 348 aa12.64□□□□□ -0.39
CLSTN3-216ENST00000545663 NHLRC4P0CG21 123 aaPredicted RBP12.64□□□□□ -0.39
CLSTN3-216ENST00000545663 NR2F1P10589 423 aa12.64□□□□□ -0.39
CLSTN3-216ENST00000545663 AHCYP23526 432 aa12.64□□□□□ -0.39
CLSTN3-216ENST00000545663 ARF6P62330 175 aa12.64□□□□□ -0.39
CLSTN3-216ENST00000545663 HOXA4Q00056 320 aaPredicted RBP12.64□□□□□ -0.39
CLSTN3-216ENST00000545663 PAGE3Q5JUK9 113 aa12.64□□□□□ -0.39
CLSTN3-216ENST00000545663 RNF144BQ7Z419 303 aa12.64□□□□□ -0.39
CLSTN3-216ENST00000545663 PEX5LQ8IYB4 626 aa12.64□□□□□ -0.39
CLSTN3-216ENST00000545663 OR8J3Q8NGG0 315 aa12.64□□□□□ -0.39
CLSTN3-216ENST00000545663 MOGAT1Q96PD6 335 aa12.64□□□□□ -0.39
CLSTN3-216ENST00000545663 CGREF1Q99674 301 aa12.64□□□□□ -0.39
CLSTN3-216ENST00000545663 SPATA9Q9BWV2 254 aa12.64□□□□□ -0.39
CLSTN3-216ENST00000545663 TAGLN3Q9UI15 199 aa12.64□□□□□ -0.39
CLSTN3-216ENST00000545663 HUWE1Q7Z6Z7 4374 aaKnown RBP12.63□□□□□ -0.39
CLSTN3-216ENST00000545663 PHYHO14832 338 aa12.63□□□□□ -0.39
CLSTN3-216ENST00000545663 QDPRP09417 244 aa12.63□□□□□ -0.39
CLSTN3-216ENST00000545663 CDKN2CP42773 168 aa12.63□□□□□ -0.39
CLSTN3-216ENST00000545663 CRATP43155 626 aa12.63□□□□□ -0.39
CLSTN3-216ENST00000545663 PUDPQ08623 228 aa12.63□□□□□ -0.39
CLSTN3-216ENST00000545663 NKAPLQ5M9Q1 402 aa12.63□□□□□ -0.39
CLSTN3-216ENST00000545663 METTL11BQ5VVY1 283 aa12.63□□□□□ -0.39
CLSTN3-216ENST00000545663 DLEU7Q6UYE1 221 aa12.63□□□□□ -0.39
CLSTN3-216ENST00000545663 TRPM8Q7Z2W7 1104 aa12.63□□□□□ -0.39
CLSTN3-216ENST00000545663 NET1Q7Z628 596 aaPredicted RBP12.63□□□□□ -0.39
CLSTN3-216ENST00000545663 SLC30A8Q8IWU4 369 aa12.63□□□□□ -0.39
CLSTN3-216ENST00000545663 SLC38A4Q969I6 547 aa12.63□□□□□ -0.39
CLSTN3-216ENST00000545663 P2RX2Q9UBL9 471 aa12.63□□□□□ -0.39
CLSTN3-216ENST00000545663 RPUSD1Q9UJJ7 312 aaKnown RBP12.63□□□□□ -0.39
CLSTN3-216ENST00000545663 ZNF443Q9Y2A4 671 aaPredicted RBP12.63□□□□□ -0.39
CLSTN3-216ENST00000545663 TRBV5-3A0A0A0MS03 114 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 A0A1W2PRD5 423 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 A0A1W2PRF3 423 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 A0A1W2PRM7 423 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 C11orf98E9PRG8 122 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 FBP2O00757 339 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 PLPP3O14495 311 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 BGLAPP02818 100 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 BMP2P12643 396 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 GPX2P18283 190 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 CALB2P22676 271 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 PMELP40967 661 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 GDI2P50395 445 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 ERFP50548 548 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 RGNQ15493 299 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 LIN52Q52LA3 116 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 C11orf88Q6PI97 169 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 PXKQ7Z7A4 578 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 DPPA2Q7Z7J5 298 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 CALHM3Q86XJ0 350 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 NDUFA11Q86Y39 141 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 PTOV1Q86YD1 416 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 TECTBQ96PL2 329 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 CACYBPQ9HB71 228 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 VAPAQ9P0L0 249 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 PRDM4Q9UKN5 801 aa12.62□□□□□ -0.39
CLSTN3-216ENST00000545663 E9PQ18 207 aa12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 HNRNPCL1O60812 293 aaKnown RBP12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 F13BP05160 661 aa12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 FBP1P09467 338 aa12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 ZNF32P17041 273 aa12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 HOXB9P17482 250 aaPredicted RBP12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 CRISP3P54108 245 aa12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 DSTNP60981 165 aa12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 MELKQ14680 651 aa12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 SPATS1Q496A3 300 aa12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 OR4C13Q8NGP0 309 aa12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 OR6X1Q8NH79 312 aa12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 OR2T6Q8NHC8 308 aa12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 RCN3Q96D15 328 aa12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 NSL1Q96IY1 281 aa12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 ECSITQ9BQ95 431 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms