RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 NUP50Q9UKX7 468 aa11.9□□□□□ -0.5
DDX11-228ENST00000545115 PPP1R3CQ9UQK1 317 aa11.9□□□□□ -0.5
DDX11-228ENST00000545115 AUP1Q9Y679 476 aa11.9□□□□□ -0.5
DDX11-228ENST00000545115 TRAPPC2LH3BP13 241 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 J3QW42 95 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 CXCR6O00574 342 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 SLC22A2O15244 555 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 CTLA4P16410 223 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 ZNF12P17014 697 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 SLC6A9P48067 706 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 SEC61A1P61619 476 aaKnown RBP11.89□□□□□ -0.51
DDX11-228ENST00000545115 SF3A3Q12874 501 aaKnown RBP eCLIP11.89□□□□□ -0.51
DDX11-228ENST00000545115 FOXL1Q12952 345 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 ZMYND11Q15326 602 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 TUSC1Q2TAM9 212 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 CGB2Q6NT52 195 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 C1orf94Q6P1W5 598 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 TBPL2Q6SJ96 375 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 FKBP9P1Q75LS8 142 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 CBLL1Q75N03 491 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 RRM2BQ7LG56 351 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 FAM122BQ7Z309 247 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 SLC15A3Q8IY34 581 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 MUC20Q8N307 709 aaPredicted RBP11.89□□□□□ -0.51
DDX11-228ENST00000545115 HAVCR1Q96D42 359 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 HSH2DQ96JZ2 352 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 OR2V2Q96R30 315 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 GPA33Q99795 319 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 MRI1Q9BV20 369 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 ANKRD19PQ9H560 264 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 ZMAT3Q9HA38 289 aaKnown RBP11.89□□□□□ -0.51
DDX11-228ENST00000545115 ASH2LQ9UBL3 628 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 TMEM5Q9Y2B1 443 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 STARD10Q9Y365 291 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 INSIG2Q9Y5U4 225 aa11.89□□□□□ -0.51
DDX11-228ENST00000545115 F5H0A9 414 aaPredicted RBP11.88□□□□□ -0.51
DDX11-228ENST00000545115 WIPF1O43516 503 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 HKR1P10072 659 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 RAC2P15153 192 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 ZNF26P17031 533 aaPredicted RBP11.88□□□□□ -0.51
DDX11-228ENST00000545115 PRTN3P24158 256 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 SDHAP31040 664 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 RBMXP38159 391 aaKnown RBP11.88□□□□□ -0.51
DDX11-228ENST00000545115 MDH2P40926 338 aaKnown RBP11.88□□□□□ -0.51
DDX11-228ENST00000545115 RGS6P49758 472 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 ERFP50548 548 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 LSM6P62312 80 aaKnown RBP11.88□□□□□ -0.51
DDX11-228ENST00000545115 LIPEQ05469 1076 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 KRR1Q13601 381 aaKnown RBP11.88□□□□□ -0.51
DDX11-228ENST00000545115 ESCO2Q56NI9 601 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 DOK3Q7L591 496 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 POU5F2Q8N7G0 328 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 RP9Q8TA86 221 aaKnown RBP11.88□□□□□ -0.51
DDX11-228ENST00000545115 SLC7A6Q92536 515 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 PTP4A1Q93096 173 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 SYT4Q9H2B2 425 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 RERGLQ9H628 205 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 NMNAT1Q9HAN9 279 aaPredicted RBP11.88□□□□□ -0.51
DDX11-228ENST00000545115 GMPR2Q9P2T1 348 aaKnown RBP11.88□□□□□ -0.51
DDX11-228ENST00000545115 ZNF69Q9UC07 566 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 OR5V1Q9UGF6 321 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 ATPIF1Q9UII2 106 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 LRCH1Q9Y2L9 728 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 PCDHGB1Q9Y5G3 927 aa11.88□□□□□ -0.51
DDX11-228ENST00000545115 OR6C6A6NF89 314 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 DNAJC9-AS1A6NH13 148 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 TMEM178BH3BS89 294 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 IFNL4K9M1U5 179 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 GSTA4O15217 222 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 SLC16A7O60669 478 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 KHDRBS3O75525 346 aaKnown RBP11.87□□□□□ -0.51
DDX11-228ENST00000545115 NDUFB2O95178 105 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 SERPINA1P01009 418 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 H2AFXP16104 143 aaPredicted RBP11.87□□□□□ -0.51
DDX11-228ENST00000545115 MMP16P51512 607 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 KLF17Q5JT82 389 aaPredicted RBP11.87□□□□□ -0.51
DDX11-228ENST00000545115 GPR139Q6DWJ6 353 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 CYP4Z1Q86W10 505 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 GLB1L2Q8IW92 636 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 OR1F12Q8NHA8 337 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 SLC7A13Q8TCU3 470 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 RASD2Q96D21 266 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 FAM46AQ96IP4 442 aaKnown RBP11.87□□□□□ -0.51
DDX11-228ENST00000545115 GPX7Q96SL4 187 aaPredicted RBP11.87□□□□□ -0.51
DDX11-228ENST00000545115 ZNF747Q9BV97 191 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 GCM1Q9NP62 436 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 NRIP3Q9NQ35 241 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 VSX1Q9NZR4 365 aaPredicted RBP11.87□□□□□ -0.51
DDX11-228ENST00000545115 ARMCX1Q9P291 453 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 SIGLEC7Q9Y286 467 aa11.87□□□□□ -0.51
DDX11-228ENST00000545115 COA3Q9Y2R0 106 aaPredicted RBP11.87□□□□□ -0.51
DDX11-228ENST00000545115 CEACAM18A8MTB9 384 aa11.86□□□□□ -0.51
DDX11-228ENST00000545115 NME4O00746 187 aa11.86□□□□□ -0.51
DDX11-228ENST00000545115 RER1O15258 196 aa11.86□□□□□ -0.51
DDX11-228ENST00000545115 SASH3O75995 380 aa11.86□□□□□ -0.51
DDX11-228ENST00000545115 CPT2P23786 658 aa11.86□□□□□ -0.51
DDX11-228ENST00000545115 SLC7A2P52569 658 aa11.86□□□□□ -0.51
DDX11-228ENST00000545115 CCDC92Q53HC0 331 aaPredicted RBP11.86□□□□□ -0.51
DDX11-228ENST00000545115 OTPQ5XKR4 325 aa11.86□□□□□ -0.51
DDX11-228ENST00000545115 SLC27A4Q6P1M0 643 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms