RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 DNASE1L1P49184 302 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 TOMM20Q15388 145 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 GPR139Q6DWJ6 353 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 LINC00518Q8N0U6 118 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 CHST4Q8NCG5 386 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 CADM4Q8NFZ8 388 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 OR5D18Q8NGL1 313 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 ASB5Q8WWX0 329 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 CCDC74BQ96LY2 380 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 UQCC2Q9BRT2 126 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 TINAGL1Q9GZM7 467 aaPredicted RBP14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 IFT46Q9NQC8 304 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 PPP4R1LQ9P1A2 415 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 MRPS17Q9Y2R5 130 aaKnown RBP14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 CEP250Q9BV73 2442 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 TMEM225Q6GV28 225 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 GVQW1Q8N7I0 195 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 OR13C9Q8NGT0 318 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 STEAP1Q9UHE8 339 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 ZNF407Q9C0G0 2248 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 ZFHX4Q86UP3 3567 aa14.1□□□□□ -0.15
SNRNP70-203ENST00000544278 ARPC4-TTLL3A0A0A6YYG9 625 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 NPIPB7O75200 414 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 ZNF254O75437 659 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 RBBP9O75884 186 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 TXNDC12O95881 172 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 SLC26A5P58743 744 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 HSF2Q03933 536 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 GLO1Q04760 184 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 LRRC37A5PQ49AS3 106 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 PLXDC2Q6UX71 529 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 STK35Q8TDR2 534 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 HLA-CQ95604 372 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 TMEM212A6NML5 194 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 K7ESF4 209 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 GLSO94925 669 aaPredicted RBP14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 B2MP61769 119 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 HSF1Q00613 529 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 MYBPHQ13203 477 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 RAB11BQ15907 218 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 TMEM176BQ3YBM2 270 aaPredicted RBP14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 DCAF12L2Q5VW00 463 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 OR52W1Q6IF63 320 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 NUP54Q7Z3B4 507 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 NAA40Q86UY6 237 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 STPG2Q8N412 459 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 OR4D6Q8NGJ1 314 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 GNRHR2Q96P88 292 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 IGHV5-10-1A0A0J9YXX1 117 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 A0A1W2PP11 408 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 DXOO77932 396 aaKnown RBP14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 APOC3P02656 99 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 ACSM4P0C7M7 580 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 ABOP16442 354 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 NUP62P37198 522 aaPredicted RBP14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 PSMA6P60900 246 aaKnown RBP14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 CSRP2Q16527 193 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 GALNT16Q8N428 558 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 SPEM1Q8N4L4 309 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 COQ8AQ8NI60 647 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 ELMOD3Q96FG2 381 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 OR2M2Q96R28 347 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 WDR77Q9BQA1 342 aaPredicted RBP14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 SIT1Q9Y3P8 196 aa14.09□□□□□ -0.15
SNRNP70-203ENST00000544278 GGT3PA6NGU5 568 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 G3V3Q6 166 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 CCSO14618 274 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 KCNAB3O43448 404 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 EIF4E2O60573 245 aaKnown RBP14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 ATXN7L3Q14CW9 347 aaPredicted RBP14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 SLC22A10Q63ZE4 541 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 ZNF441Q8N8Z8 693 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 C11orf40Q8WZ69 217 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 FAM71F1Q96KD3 344 aaPredicted RBP14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 ZNF436Q9C0F3 470 aaPredicted RBP14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 UBQLN2Q9UHD9 624 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 SLC5A6Q9Y289 635 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 BLACEA4D250 179 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 FTCDNL1E5RQL4 147 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 H2BFMP0C1H6 154 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 HLA-BQ31612 363 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 OR52H1Q8NGJ2 320 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 OR52N5Q8NH56 324 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 NUDCD2Q8WVJ2 157 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 LIPHQ8WWY8 451 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 RBP7Q96R05 134 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 UCK1Q9HA47 277 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 RARRES3Q9UL19 164 aa14.08□□□□□ -0.16
SNRNP70-203ENST00000544278 FXYD6-FXYD2A0A087WZ82 144 aa14.07□□□□□ -0.16
SNRNP70-203ENST00000544278 ANKRD20A5PA0PJZ0 165 aa14.07□□□□□ -0.16
SNRNP70-203ENST00000544278 PMS2P1A4D2B8 440 aa14.07□□□□□ -0.16
SNRNP70-203ENST00000544278 RER1O15258 196 aa14.07□□□□□ -0.16
SNRNP70-203ENST00000544278 ARPC5O15511 151 aa14.07□□□□□ -0.16
SNRNP70-203ENST00000544278 ZNF16P17020 682 aaPredicted RBP14.07□□□□□ -0.16
SNRNP70-203ENST00000544278 MAPK3P27361 379 aaPredicted RBP14.07□□□□□ -0.16
SNRNP70-203ENST00000544278 RPS18P62269 152 aaKnown RBP14.07□□□□□ -0.16
SNRNP70-203ENST00000544278 ISXQ2M1V0 245 aa14.07□□□□□ -0.16
SNRNP70-203ENST00000544278 TIGD3Q6B0B8 471 aa14.07□□□□□ -0.16
SNRNP70-203ENST00000544278 C11orf88Q6PI97 169 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms