RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	GMFB	P60983	142 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	TRAM1	Q15629	374 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	NSDHL	Q15738	373 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	LRRC69	Q6ZNQ3	347 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	OR51A4	Q8NGJ6	313 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	SLC2A12	Q8TD20	617 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	LPAR4	Q99677	370 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	UTP23	Q9BRU9	249 aa	Known RBP	13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	WDR76	Q9H967	626 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	RAD1	O60671	282 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	ICOSLG	O75144	302 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	GP1BA	P07359	652 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	ZNF806	P0C7X5	589 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	TMIGD3	P0DMS9	266 aa	Predicted RBP	13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	MPG	P29372	298 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	STAR	P49675	285 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	AP3S2	P59780	193 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	POU4F2	Q12837	409 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	SKP2	Q13309	424 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	BIK	Q13323	160 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	GGTLC2	Q14390	218 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	MELK	Q14680	651 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	ZNF74	Q16587	644 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	NKAIN1	Q4KMZ8	207 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	PAN3	Q58A45	887 aa	Known RBP	13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	MOB3C	Q70IA8	216 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	FAM122B	Q7Z309	247 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	ATG4D	Q86TL0	474 aa	Predicted RBP	13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	ELP5	Q8TE02	316 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	MRPL48	Q96GC5	212 aa	Known RBP	13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	AMELY	Q99218	206 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	PRR33	A8MZF0	331 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	GPR31	O00270	319 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	PLG	P00747	810 aa	Predicted RBP	13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	CD59	P13987	128 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	CNR1	P21554	472 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	MECP2	P51608	486 aa	Known RBP	13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	SLC37A1	P57057	533 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	DCD	P81605	110 aa	Known RBP	13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	HYAL4	Q2M3T9	481 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	AVPI1	Q5T686	147 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	FNDC7	Q5VTL7	733 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	FCRLA	Q7L513	359 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	SPAG16	Q8N0X2	631 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	STT3B	Q8TCJ2	826 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	SLC25A38	Q96DW6	304 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	OR51M1	Q9H341	326 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	KLK11	Q9UBX7	282 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	TRAV1-2	A0A0B4J238	106 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	UTS2	O95399	124 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	UBB	P0CG47	229 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	UBC	P0CG48	685 aa	Known RBP	13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	CCL4	P13236	92 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	RPA2	P15927	270 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	S100P	P25815	95 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	ACTA2	P62736	377 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	RPS27A	P62979	156 aa	Known RBP	13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	UBA52	P62987	128 aa	Known RBP	13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	ACTG2	P63267	376 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	TRA2A	Q13595	282 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	MEST	Q5EB52	335 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	C16orf47	Q6ZP98	133 aa	Predicted RBP	13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	SLC16A13	Q7RTY0	426 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	ARMC10	Q8N2F6	343 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	POMGNT2	Q8NAT1	580 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	AGBL5	Q8NDL9	886 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	TAAR8	Q969N4	342 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	CMTM3	Q96MX0	182 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	PIGM	Q9H3S5	423 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	KCNK15	Q9H427	330 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	MMP25	Q9NPA2	562 aa		13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	MRM2	Q9UI43	246 aa	Known RBP	13.47	□□□□□ -0.25
CHFR-223	ENST00000544268	TMEM218	A2RU14	115 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	C11orf98	E9PRG8	122 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	AKR7A3	O95154	331 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	HTR3B	O95264	441 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	ANXA7	P20073	488 aa	Known RBP	13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	TACR3	P29371	465 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	PCP4	P48539	62 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	RPL18	Q07020	188 aa	Known RBP	13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	ALG10	Q5BKT4	473 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	FAM74A1	Q5RGS3	127 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	ZNF385C	Q66K41	422 aa	Predicted RBP	13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	ELP2	Q6IA86	826 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	RPL22L1	Q6P5R6	122 aa	Known RBP	13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	LANCL3	Q6ZV70	420 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	LINGO2	Q7L985	606 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	MARCH3	Q86UD3	253 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	CBLN2	Q8IUK8	224 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	SYS1	Q8N2H4	156 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	TEX19	Q8NA77	164 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	LRRC75A	Q8NAA5	344 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	PPP1R14A	Q96A00	147 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	TSPAN32	Q96QS1	320 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	MFF	Q9GZY8	342 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	FRRS1L	Q9P0K9	344 aa		13.46	□□□□□ -0.25
CHFR-223	ENST00000544268	COL5A1	P20908	1838 aa	Predicted RBP	13.46	□□□□□ -0.26
CHFR-223	ENST00000544268	IGLV3-12	A0A075B6K2	115 aa		13.45	□□□□□ -0.26

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