RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 OR5B12Q96R08 314 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 IL4I1Q96RQ9 567 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 DIRC2Q96SL1 478 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 P2RX7Q99572 595 aaKnown RBP3.92□□□□□ -1.78
SNHG1-219ENST00000542112 HIST1H2BNQ99877 126 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 HIST1H2BMQ99879 126 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 CCDC3Q9BQI4 270 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 TPPP3Q9BW30 176 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 SLC25A31Q9H0C2 315 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ZBP1Q9H171 429 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ATG5Q9H1Y0 275 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 CST9LQ9H4G1 147 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 RIOX1Q9H6W3 641 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 AUNIPQ9H7T9 357 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 SLC17A5Q9NRA2 495 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 TMEM140Q9NV12 185 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 GPATCH2LQ9NWQ4 482 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 GPR83Q9NYM4 423 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 SEMA5BQ9P283 1151 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 Q9UFV3 132 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 TNFRSF18Q9Y5U5 241 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 A0A087WZ62 844 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 IGHV2OR16-5A0A0B4J2B6 119 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 A0A1W2PPV4 95 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 NKX2-6A6NCS4 301 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 OR5H14A6NHG9 310 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 FAM166BA8MTA8 275 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 FAM157AC9JC47 383 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 C1QTNF3-AMACRE9PGA6 284 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 GABARAPH6UMI1 98 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 SULT2B1O00204 365 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 CORTO00230 105 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 ARPC3O15145 178 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 YY2O15391 372 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 CCL25O15444 150 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 CSO75390 466 aaKnown RBP3.91□□□□□ -1.78
SNHG1-219ENST00000542112 RBMXL2O75526 392 aaKnown RBP3.91□□□□□ -1.78
SNHG1-219ENST00000542112 GRAP2O75791 330 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 FARS2O95363 451 aaKnown RBP3.91□□□□□ -1.78
SNHG1-219ENST00000542112 OR2C1O95371 312 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 PMS2P2O95744 297 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 RAB36O95755 333 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 IGSF6O95976 241 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 SOD3P08294 240 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 FCGR3AP08637 254 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 IL3P08700 152 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 SMIM10L2AP0DMW4 78 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 SMIM10L2BP0DMW5 78 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 ETFAP13804 333 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 ATF1P18846 271 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 MGAT1P26572 445 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 IL12BP29460 328 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 CMPK1P30085 196 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 TLX1P31314 330 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-219ENST00000542112 ERVPABLB-1P60509 514 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 PPP2CBP62714 309 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 PPP2CAP67775 309 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 CYCSP99999 105 aaKnown RBP3.91□□□□□ -1.78
SNHG1-219ENST00000542112 PMP22Q01453 160 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 SLC25A11Q02978 314 aaKnown RBP3.91□□□□□ -1.78
SNHG1-219ENST00000542112 AIMP2Q13155 320 aaKnown RBP3.91□□□□□ -1.78
SNHG1-219ENST00000542112 DOCK1Q14185 1865 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 PTPRCAPQ14761 206 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 SNRNP35Q16560 246 aaKnown RBP3.91□□□□□ -1.78
SNHG1-219ENST00000542112 PRSS8Q16651 343 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 MLANAQ16655 118 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 TMEM183BQ1AE95 376 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 FBLN7Q53RD9 439 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 TMEM69Q5SWH9 247 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 FAM182AQ5T1J6 154 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 AGBL4Q5VU57 503 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 CARD17Q5XLA6 110 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 OR2T2Q6IF00 324 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 C11orf87Q6NUJ2 197 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 LILRA6Q6PI73 481 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 ENPP7Q6UWV6 458 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 MBOAT2Q6ZWT7 520 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 OTOP2Q7RTS6 562 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 LRRC70Q7Z2Q7 622 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 COMMD6Q7Z4G1 85 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 DEFB128Q7Z7B8 93 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 TMEM179BQ7Z7N9 219 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 NIT1Q86X76 327 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 CALHM3Q86XJ0 350 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 SIAH3Q8IW03 269 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 TUSC5Q8IXB3 177 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 LYG1Q8N1E2 194 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 KDM8Q8N371 416 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 PNKDQ8N490 385 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 WDTC1Q8N5D0 677 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 FAM24BQ8N5W8 94 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 HORMAD2Q8N7B1 307 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 RELL2Q8NC24 303 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-219ENST00000542112 CHST13Q8NET6 341 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 STXBP6Q8NFX7 210 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 OR2AK2Q8NG84 335 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 OR11G2Q8NGC1 345 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 OR51S1Q8NGJ8 323 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 OR4A4PQ8NGN8 299 aa3.91□□□□□ -1.78
SNHG1-219ENST00000542112 OR8J1Q8NGP2 316 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms