RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ALS2CR12Q96Q35 445 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 SMIM14Q96QK8 99 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 SLC29A1Q99808 456 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 P2RY13Q9BPV8 354 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 EBF4Q9BQW3 602 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 PELOQ9BRX2 385 aaKnown RBP3.22□□□□□ -1.89
SNHG1-217ENST00000541578 ZSCAN16Q9H4T2 348 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-217ENST00000541578 ELOVL6Q9H5J4 265 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 ADAP2Q9NPF8 381 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 PXMP2Q9NR77 195 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 FKBP14Q9NWM8 211 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 DNAH14Q0VDD8 3507 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 GREB1Q4ZG55 1949 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 NBEAQ8NFP9 2946 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 ABCB11O95342 1321 aa3.21□□□□□ -1.89
SNHG1-217ENST00000541578 CCDC171Q6TFL3 1326 aa3.21□□□□□ -1.89
SNHG1-217ENST00000541578 LCTP09848 1927 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 NCOR2Q9Y618 2525 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 IGLV8-61A0A075B6I0 122 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 TRAV25A0A0B4J276 109 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 IGKV6D-41A0A0C4DH26 115 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 A6NIZ1 184 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 TEX46H3BTG2 121 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 CDC7O00311 574 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 CCL21O00585 134 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 EIF3HO15372 352 aaKnown RBP eCLIP3.21□□□□□ -1.9
SNHG1-217ENST00000541578 CLPXO76031 633 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 OR2F2O95006 317 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 FGGP02679 453 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 FGF1P05230 155 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 SMIM10L2AP0DMW4 78 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 SMIM10L2BP0DMW5 78 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 FASP25445 335 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 STOMP27105 288 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 RPS5P46782 204 aaKnown RBP3.21□□□□□ -1.9
SNHG1-217ENST00000541578 MRPL19P49406 292 aaKnown RBP3.21□□□□□ -1.9
SNHG1-217ENST00000541578 UGT2B15P54855 530 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 CARD18P57730 90 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 KRTAP10-3P60369 221 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 RAP1BP61224 184 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 RAB11AP62491 216 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 CSNK1G2P78368 415 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 PAX5Q02548 391 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 SPAG1Q07617 926 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 RAB11BQ15907 218 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 ISXQ2M1V0 245 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 C1orf146Q5VVC0 180 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 TRIM40Q6P9F5 258 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 TFAP2EQ6VUC0 442 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 ZNF836Q6ZNA1 936 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 HSD17B13Q7Z5P4 300 aaPredicted RBP3.21□□□□□ -1.9
SNHG1-217ENST00000541578 PPP1R27Q86WC6 154 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 PRR22Q8IZ63 422 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 FBXL16Q8N461 479 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 RNF10Q8N5U6 811 aaKnown RBP3.21□□□□□ -1.9
SNHG1-217ENST00000541578 OR13F1Q8NGS4 319 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 GLYATL2Q8WU03 294 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 MS4A4EQ96PG1 132 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 SIGLEC12Q96PQ1 595 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 CGREF1Q99674 301 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 KIR2DL4Q99706 377 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 SPZ1Q9BXG8 430 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 Q9H3A6 140 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 POMKQ9H5K3 350 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 CD274Q9NZQ7 290 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 APOBEC3BQ9UH17 382 aaKnown RBP3.21□□□□□ -1.9
SNHG1-217ENST00000541578 ATPIF1Q9UII2 106 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 ASF1AQ9Y294 204 aa3.21□□□□□ -1.9
SNHG1-217ENST00000541578 SETXQ7Z333 2677 aaKnown RBP3.21□□□□□ -1.9
SNHG1-217ENST00000541578 GPR179Q6PRD1 2367 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 PCNX2A6NKB5 2137 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 FRYQ5TBA9 3013 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 IGHV1OR15-1A0A075B7D0 117 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 IGHV3OR16-13A0A075B7E8 117 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 RBMY1BA6NDE4 496 aaKnown RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 RBMY1EA6NEQ0 496 aaKnown RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 EEDO75530 441 aaKnown RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 CCNB2O95067 398 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 SNAPINO95295 136 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 C1orf105O95561 183 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 OTCP00480 354 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 MBP02144 154 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 ALDOBP05062 364 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 PLEKP08567 350 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 RHOXF2BP0C7M4 288 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 RBMY1DP0C7P1 496 aaKnown RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 RBMY1A1P0DJD3 496 aaKnown RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 CALM1P0DP23 149 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 CALM2P0DP24 149 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 CALM3P0DP25 149 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 RPS9P46781 194 aaKnown RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 OR1G1P47890 313 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 RPS14P62263 151 aaKnown RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 DYNC1I2Q13409 638 aaKnown RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 SF3A2Q15428 464 aaKnown RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 HIKESHIQ53FT3 197 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 XKR4Q5GH76 650 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 GPRC6AQ5T6X5 926 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 AGBL2Q5U5Z8 902 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 C11orf71Q6IPW1 123 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms